Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.52□□□□□ -0.56
P04436 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC11.52□□□□□ -0.56
P04436 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.52□□□□□ -0.56
P04436 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04436 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
P04436 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04436 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
P04436 AL122018.1-201ENST00000446607 2310 ntBASIC11.52□□□□□ -0.57
P04436 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 HERC2P9-206ENST00000529624 5187 ntBASIC11.52□□□□□ -0.57
P04436 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 PGC-204ENST00000425343 1152 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 AC006967.2-201ENST00000426169 432 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 AL954722.1-201ENST00000431238 259 ntBASIC11.52□□□□□ -0.57
P04436 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.52□□□□□ -0.57
P04436 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 RAET1G-203ENST00000479265 1078 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
P04436 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
P04436 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 RN7SL732P-201ENST00000581157 300 ntBASIC11.52□□□□□ -0.57
P04436 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 ZNF226-212ENST00000588795 641 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC11.52□□□□□ -0.57
P04436 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC11.52□□□□□ -0.57
P04436 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC11.52□□□□□ -0.57
P04436 AC112702.1-201ENST00000623712 366 ntBASIC11.52□□□□□ -0.57
P04436 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 AC245369.8-201ENST00000636589 306 ntBASIC11.52□□□□□ -0.57
P04436 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
P04436 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 TUBA3GP-201ENST00000410028 1325 ntBASIC11.52□□□□□ -0.57
P04436 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 WDSUB1-204ENST00000409124 1600 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
P04436 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
P04436 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.52□□□□□ -0.57
P04436 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
P04436 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC11.52□□□□□ -0.57
P04436 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04436 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04436 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.51□□□□□ -0.57
P04436 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC11.51□□□□□ -0.57
P04436 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
P04436 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
P04436 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 FAM90A17P-201ENST00000533716 1957 ntBASIC11.51□□□□□ -0.57
P04436 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 GALM-202ENST00000410063 1023 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC11.51□□□□□ -0.57
P04436 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 IQCJ-202ENST00000451172 885 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC11.51□□□□□ -0.57
P04436 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04436 RN7SL677P-201ENST00000466970 319 ntBASIC11.51□□□□□ -0.57
P04436 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC11.51□□□□□ -0.57
P04436 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 AC110753.1-201ENST00000505711 1022 ntBASIC11.51□□□□□ -0.57
P04436 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC11.51□□□□□ -0.57
P04436 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P04436 ZNF576-204ENST00000528387 859 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
P04436 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC11.51□□□□□ -0.57
P04436 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC11.51□□□□□ -0.57
P04436 KRT18P7-201ENST00000557241 1219 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms