Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 OR2I1P-207ENST00000453522 948 ntBASIC9.2□□□□□ -0.94
MACF1Q9UPN3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 AC079140.4-201ENST00000507448 529 ntBASIC9.2□□□□□ -0.94
MACF1Q9UPN3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 UPK3BP1-201ENST00000428678 509 ntBASIC9.2□□□□□ -0.94
MACF1Q9UPN3 AC005363.2-201ENST00000618631 242 ntBASIC9.2□□□□□ -0.94
MACF1Q9UPN3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 MIR6786-201ENST00000616843 113 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 AL353708.3-201ENST00000610272 989 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 AC010525.1-201ENST00000585559 441 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 TSPY7P-201ENST00000431358 1114 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 RPS2P55-201ENST00000397318 883 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 CRYGFP-201ENST00000418459 633 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 AC107956.1-201ENST00000494359 873 ntBASIC9.19□□□□□ -0.94
MACF1Q9UPN3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC9.19□□□□□ -0.94
MACF1Q9UPN3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 AC004263.2-201ENST00000617183 678 ntBASIC9.18□□□□□ -0.94
MACF1Q9UPN3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 PENK-204ENST00000518770 863 ntTSL 2 BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
MACF1Q9UPN3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 KRT18P48-201ENST00000434763 852 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 DUSP5P1-201ENST00000441325 1139 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 KRT18P16-201ENST00000510337 1294 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AC097658.1-201ENST00000475555 843 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 NMU-205ENST00000511469 756 ntTSL 3 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AC010536.3-201ENST00000620306 533 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms