Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHAC1Q9H158 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHAC1Q9H158 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 LINC01960-201ENST00000563759 1884 ntBASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 AC244015.2-201ENST00000616358 1861 ntBASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHAC1Q9H158 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHAC1Q9H158 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 AC012354.3-201ENST00000623734 483 ntBASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHAC1Q9H158 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 AF106564.1-201ENST00000607058 2553 ntBASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHAC1Q9H158 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 AL157384.1-201ENST00000445995 2473 ntBASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHAC1Q9H158 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHAC1Q9H158 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms