Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 MIR620-201ENST00000385232 95 ntBASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 RNU2-72P-201ENST00000411175 163 ntBASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 AL355802.1-201ENST00000417591 990 ntTSL 3 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 AC009502.2-201ENST00000452903 766 ntBASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 TAAR4P-201ENST00000454843 1039 ntBASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 Y_RNA.655-201ENST00000515919 96 ntBASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 AC004775.1-201ENST00000607389 753 ntBASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 C2-AS1-201ENST00000630806 762 ntTSL 2 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 ATF2-207ENST00000409833 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KRTAP3-3Q9BYR6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 BCAS2P2-201ENST00000425064 674 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AL031432.1-201ENST00000455902 988 ntTSL 3 BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AP004833.1-201ENST00000507987 1238 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 BOLA3P1-201ENST00000530713 355 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AC012467.1-201ENST00000607740 256 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AC116631.1-202ENST00000640984 683 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AL033527.5-201ENST00000641382 801 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 MTND4P9-201ENST00000507819 1346 ntBASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KRTAP3-3Q9BYR6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 AC233723.2-201ENST00000623798 2106 ntBASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 NDUFA5P8-201ENST00000449019 346 ntBASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 UBE2D3-211ENST00000502404 574 ntTSL 4 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 MTCYBP33-201ENST00000575007 1130 ntBASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 AC133794.1-201ENST00000602731 914 ntBASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 AL118508.4-201ENST00000624142 1176 ntBASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
KRTAP3-3Q9BYR6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 RSL24D1P1-201ENST00000404972 493 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 RRM2P4-201ENST00000441721 562 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 RBMS3-207ENST00000445033 1120 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 COL6A4P2-205ENST00000509855 506 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 LRRC34P1-201ENST00000542742 915 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AP001357.1-201ENST00000586304 1053 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AC005498.2-205ENST00000593218 784 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AC015726.1-201ENST00000602353 681 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AC079315.1-201ENST00000602952 623 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AL356490.1-201ENST00000623079 479 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 AL162574.3-201ENST00000623209 612 ntBASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
KRTAP3-3Q9BYR6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 AC019072.1-201ENST00000604535 1551 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms