RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 AEBP2Q6ZN18 517 aaPredicted RBP30.59■■■□□ 2.49
COL6A4P2-205ENST00000509855 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
COL6A4P2-205ENST00000509855 PHF23Q9BUL5 403 aaPredicted RBP26.48■■□□□ 1.83
COL6A4P2-205ENST00000509855 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
COL6A4P2-205ENST00000509855 PLPPR3Q6T4P5 718 aa24.52■■□□□ 1.52
COL6A4P2-205ENST00000509855 FOXD1Q16676 465 aa24.03■■□□□ 1.44
COL6A4P2-205ENST00000509855 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
COL6A4P2-205ENST00000509855 ADRA2BP18089 450 aa23.23■■□□□ 1.31
COL6A4P2-205ENST00000509855 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
COL6A4P2-205ENST00000509855 MSH5O43196 834 aa22.1■■□□□ 1.13
COL6A4P2-205ENST00000509855 PPP4R3CPQ6ZMV5 832 aa21.61■■□□□ 1.05
COL6A4P2-205ENST00000509855 KCNA4P22459 653 aa21.34■■□□□ 1.01
COL6A4P2-205ENST00000509855 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
COL6A4P2-205ENST00000509855 NCBP3Q53F19 620 aaKnown RBP21.11■□□□□ 0.97
COL6A4P2-205ENST00000509855 MAPK8IP2Q13387 824 aaPredicted RBP21■□□□□ 0.95
COL6A4P2-205ENST00000509855 CNKSR2Q8WXI2 1034 aa20.99■□□□□ 0.95
COL6A4P2-205ENST00000509855 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
COL6A4P2-205ENST00000509855 NPM3O75607 178 aaKnown RBP20.8■□□□□ 0.92
COL6A4P2-205ENST00000509855 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
COL6A4P2-205ENST00000509855 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
COL6A4P2-205ENST00000509855 HOXD11P31277 338 aaPredicted RBP20.43■□□□□ 0.86
COL6A4P2-205ENST00000509855 SLC4A1APQ9BWU0 796 aaKnown RBP20.34■□□□□ 0.85
COL6A4P2-205ENST00000509855 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
COL6A4P2-205ENST00000509855 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
COL6A4P2-205ENST00000509855 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
COL6A4P2-205ENST00000509855 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
COL6A4P2-205ENST00000509855 ZBTB22O15209 634 aa19.66■□□□□ 0.74
COL6A4P2-205ENST00000509855 SLC4A2P04920 1241 aa19.61■□□□□ 0.73
COL6A4P2-205ENST00000509855 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
COL6A4P2-205ENST00000509855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
COL6A4P2-205ENST00000509855 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
COL6A4P2-205ENST00000509855 U3KPZ7 1027 aaPredicted RBP19.13■□□□□ 0.65
COL6A4P2-205ENST00000509855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.97■□□□□ 0.63
COL6A4P2-205ENST00000509855 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
COL6A4P2-205ENST00000509855 RNF39Q9H2S5 420 aa18.97■□□□□ 0.63
COL6A4P2-205ENST00000509855 ATXN8OSP0DMR3 200 aa18.95■□□□□ 0.62
COL6A4P2-205ENST00000509855 SAMD1Q6SPF0 538 aaPredicted RBP18.91■□□□□ 0.62
COL6A4P2-205ENST00000509855 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
COL6A4P2-205ENST00000509855 APLP2Q06481 763 aa18.72■□□□□ 0.59
COL6A4P2-205ENST00000509855 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
COL6A4P2-205ENST00000509855 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
COL6A4P2-205ENST00000509855 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
COL6A4P2-205ENST00000509855 CAPN15O75808 1086 aa18.38■□□□□ 0.53
COL6A4P2-205ENST00000509855 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
COL6A4P2-205ENST00000509855 CACNB1Q02641 598 aaPredicted RBP18.24■□□□□ 0.51
COL6A4P2-205ENST00000509855 POLA2Q14181 598 aa18.13■□□□□ 0.49
COL6A4P2-205ENST00000509855 DSG3P32926 999 aa18.1■□□□□ 0.49
COL6A4P2-205ENST00000509855 ABCB7O75027 752 aa18.04■□□□□ 0.48
COL6A4P2-205ENST00000509855 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
COL6A4P2-205ENST00000509855 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
COL6A4P2-205ENST00000509855 FBLN2P98095 1184 aa17.87■□□□□ 0.45
COL6A4P2-205ENST00000509855 FKBP8Q14318 412 aa17.75■□□□□ 0.43
COL6A4P2-205ENST00000509855 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
COL6A4P2-205ENST00000509855 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
COL6A4P2-205ENST00000509855 SPDYE2BA6NHP3 402 aa17.44■□□□□ 0.38
COL6A4P2-205ENST00000509855 SPDYE6P0CI01 402 aa17.44■□□□□ 0.38
COL6A4P2-205ENST00000509855 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
COL6A4P2-205ENST00000509855 PROM2Q8N271 834 aa17.41■□□□□ 0.38
COL6A4P2-205ENST00000509855 SSUH2Q9Y2M2 353 aa17.34■□□□□ 0.37
COL6A4P2-205ENST00000509855 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
COL6A4P2-205ENST00000509855 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
COL6A4P2-205ENST00000509855 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL6A4P2-205ENST00000509855 FBXO3Q9UK99 471 aa17.12■□□□□ 0.33
COL6A4P2-205ENST00000509855 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
COL6A4P2-205ENST00000509855 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
COL6A4P2-205ENST00000509855 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
COL6A4P2-205ENST00000509855 VASPP50552 380 aaPredicted RBP16.88■□□□□ 0.29
COL6A4P2-205ENST00000509855 SPDYE1Q8NFV5 336 aaPredicted RBP16.85■□□□□ 0.29
COL6A4P2-205ENST00000509855 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
COL6A4P2-205ENST00000509855 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
COL6A4P2-205ENST00000509855 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
COL6A4P2-205ENST00000509855 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
COL6A4P2-205ENST00000509855 MIER1Q8N108 512 aa16.6■□□□□ 0.25
COL6A4P2-205ENST00000509855 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
COL6A4P2-205ENST00000509855 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
COL6A4P2-205ENST00000509855 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
COL6A4P2-205ENST00000509855 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
COL6A4P2-205ENST00000509855 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
COL6A4P2-205ENST00000509855 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
COL6A4P2-205ENST00000509855 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
COL6A4P2-205ENST00000509855 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
COL6A4P2-205ENST00000509855 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
COL6A4P2-205ENST00000509855 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL6A4P2-205ENST00000509855 MNX1P50219 401 aaPredicted RBP16.37■□□□□ 0.21
COL6A4P2-205ENST00000509855 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
COL6A4P2-205ENST00000509855 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
COL6A4P2-205ENST00000509855 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
COL6A4P2-205ENST00000509855 NUBP1P53384 320 aa16.22■□□□□ 0.19
COL6A4P2-205ENST00000509855 POTEHQ6S545 545 aa16.21■□□□□ 0.19
COL6A4P2-205ENST00000509855 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL6A4P2-205ENST00000509855 PKD2Q13563 968 aa16.19■□□□□ 0.18
COL6A4P2-205ENST00000509855 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
COL6A4P2-205ENST00000509855 GSE1Q14687 1217 aa16.08■□□□□ 0.16
COL6A4P2-205ENST00000509855 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
COL6A4P2-205ENST00000509855 FAM212AQ96EL1 285 aa16.06■□□□□ 0.16
COL6A4P2-205ENST00000509855 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
COL6A4P2-205ENST00000509855 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
COL6A4P2-205ENST00000509855 ECM2O94769 699 aaPredicted RBP16■□□□□ 0.15
COL6A4P2-205ENST00000509855 DCAF8Q5TAQ9 597 aa16■□□□□ 0.15
COL6A4P2-205ENST00000509855 CHRM1P11229 460 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms