RNA–Protein interactions for RNA: ENST00000627699.1

LGI1-209, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 3 BASIC

Gene LGI1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-209ENST00000627699 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
LGI1-209ENST00000627699 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
LGI1-209ENST00000627699 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
LGI1-209ENST00000627699 PHF23Q9BUL5 403 aaPredicted RBP25.47■■□□□ 1.67
LGI1-209ENST00000627699 FOXD1Q16676 465 aa23.99■■□□□ 1.43
LGI1-209ENST00000627699 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
LGI1-209ENST00000627699 PPP6R1Q9UPN7 881 aa22.58■■□□□ 1.21
LGI1-209ENST00000627699 ADRA2BP18089 450 aa22.51■■□□□ 1.19
LGI1-209ENST00000627699 PIAS4Q8N2W9 510 aaPredicted RBP22.47■■□□□ 1.19
LGI1-209ENST00000627699 MSH5O43196 834 aa22.42■■□□□ 1.18
LGI1-209ENST00000627699 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
LGI1-209ENST00000627699 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
LGI1-209ENST00000627699 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
LGI1-209ENST00000627699 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
LGI1-209ENST00000627699 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
LGI1-209ENST00000627699 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
LGI1-209ENST00000627699 HOXD11P31277 338 aaPredicted RBP19.84■□□□□ 0.77
LGI1-209ENST00000627699 RNF216Q9NWF9 866 aaPredicted RBP19.76■□□□□ 0.75
LGI1-209ENST00000627699 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
LGI1-209ENST00000627699 DCAF8L1A6NGE4 600 aa19.57■□□□□ 0.72
LGI1-209ENST00000627699 NPM3O75607 178 aaKnown RBP19.39■□□□□ 0.69
LGI1-209ENST00000627699 KCNA4P22459 653 aa19.2■□□□□ 0.66
LGI1-209ENST00000627699 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
LGI1-209ENST00000627699 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
LGI1-209ENST00000627699 CACNB1Q02641 598 aaPredicted RBP19.05■□□□□ 0.64
LGI1-209ENST00000627699 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
LGI1-209ENST00000627699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
LGI1-209ENST00000627699 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
LGI1-209ENST00000627699 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
LGI1-209ENST00000627699 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
LGI1-209ENST00000627699 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
LGI1-209ENST00000627699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
LGI1-209ENST00000627699 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
LGI1-209ENST00000627699 CAPN15O75808 1086 aa18.1■□□□□ 0.49
LGI1-209ENST00000627699 APLP2Q06481 763 aa18.07■□□□□ 0.48
LGI1-209ENST00000627699 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
LGI1-209ENST00000627699 DSG3P32926 999 aa17.98■□□□□ 0.47
LGI1-209ENST00000627699 MYCNP04198 464 aaPredicted RBP17.96■□□□□ 0.47
LGI1-209ENST00000627699 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
LGI1-209ENST00000627699 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
LGI1-209ENST00000627699 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
LGI1-209ENST00000627699 ABCB7O75027 752 aa17.68■□□□□ 0.42
LGI1-209ENST00000627699 ZBTB22O15209 634 aa17.65■□□□□ 0.42
LGI1-209ENST00000627699 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
LGI1-209ENST00000627699 POLA2Q14181 598 aa17.45■□□□□ 0.38
LGI1-209ENST00000627699 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
LGI1-209ENST00000627699 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
LGI1-209ENST00000627699 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
LGI1-209ENST00000627699 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
LGI1-209ENST00000627699 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
LGI1-209ENST00000627699 POTEHQ6S545 545 aa16.87■□□□□ 0.29
LGI1-209ENST00000627699 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
LGI1-209ENST00000627699 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
LGI1-209ENST00000627699 FBLN2P98095 1184 aa16.82■□□□□ 0.28
LGI1-209ENST00000627699 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
LGI1-209ENST00000627699 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
LGI1-209ENST00000627699 SPDYE2BA6NHP3 402 aa16.65■□□□□ 0.26
LGI1-209ENST00000627699 SPDYE6P0CI01 402 aa16.65■□□□□ 0.26
LGI1-209ENST00000627699 SPDYE2Q495Y8 402 aa16.65■□□□□ 0.26
LGI1-209ENST00000627699 REM2Q8IYK8 340 aaPredicted RBP16.64■□□□□ 0.25
LGI1-209ENST00000627699 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
LGI1-209ENST00000627699 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
LGI1-209ENST00000627699 SSUH2Q9Y2M2 353 aa16.45■□□□□ 0.22
LGI1-209ENST00000627699 PIP4P2Q8N4L2 257 aa16.33■□□□□ 0.2
LGI1-209ENST00000627699 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
LGI1-209ENST00000627699 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
LGI1-209ENST00000627699 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
LGI1-209ENST00000627699 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
LGI1-209ENST00000627699 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
LGI1-209ENST00000627699 PRKAR2AP13861 404 aaKnown RBP16.02■□□□□ 0.16
LGI1-209ENST00000627699 PRR29P0C7W0 189 aa16■□□□□ 0.15
LGI1-209ENST00000627699 HAX1O00165 279 aa15.96■□□□□ 0.15
LGI1-209ENST00000627699 SP7Q8TDD2 431 aaPredicted RBP15.92■□□□□ 0.14
LGI1-209ENST00000627699 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
LGI1-209ENST00000627699 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
LGI1-209ENST00000627699 C19orf67A6NJJ6 358 aa15.75■□□□□ 0.11
LGI1-209ENST00000627699 EVX2Q03828 476 aa15.75■□□□□ 0.11
LGI1-209ENST00000627699 PROM2Q8N271 834 aa15.72■□□□□ 0.11
LGI1-209ENST00000627699 FARP1Q9Y4F1 1045 aaPredicted RBP15.69■□□□□ 0.1
LGI1-209ENST00000627699 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
LGI1-209ENST00000627699 CD44P16070 742 aaKnown RBP15.53■□□□□ 0.08
LGI1-209ENST00000627699 GABBR2O75899 941 aa15.45■□□□□ 0.06
LGI1-209ENST00000627699 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
LGI1-209ENST00000627699 FKBP8Q14318 412 aa15.43■□□□□ 0.06
LGI1-209ENST00000627699 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
LGI1-209ENST00000627699 CLCN6P51797 869 aa15.38■□□□□ 0.05
LGI1-209ENST00000627699 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
LGI1-209ENST00000627699 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
LGI1-209ENST00000627699 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
LGI1-209ENST00000627699 PLEKHG5O94827 1062 aa15.27■□□□□ 0.04
LGI1-209ENST00000627699 MIER1Q8N108 512 aa15.25■□□□□ 0.03
LGI1-209ENST00000627699 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
LGI1-209ENST00000627699 PHF12Q96QT6 1004 aa15.12■□□□□ 0.01
LGI1-209ENST00000627699 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
LGI1-209ENST00000627699 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
LGI1-209ENST00000627699 ZBTB47Q9UFB7 747 aaPredicted RBP15.1■□□□□ 0.01
LGI1-209ENST00000627699 GALR2O43603 387 aaPredicted RBP15.09■□□□□ 0.01
LGI1-209ENST00000627699 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
LGI1-209ENST00000627699 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
LGI1-209ENST00000627699 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms