Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.56□□□□□ -0.08
LITAFQ99732 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
LITAFQ99732 RPS2P7-201ENST00000447334 885 ntBASIC14.56□□□□□ -0.08
LITAFQ99732 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.56□□□□□ -0.08
LITAFQ99732 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.56□□□□□ -0.08
LITAFQ99732 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LITAFQ99732 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.55□□□□□ -0.08
LITAFQ99732 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.55□□□□□ -0.08
LITAFQ99732 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.55□□□□□ -0.08
LITAFQ99732 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
LITAFQ99732 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LITAFQ99732 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LITAFQ99732 LINC01960-201ENST00000563759 1884 ntBASIC14.55□□□□□ -0.08
LITAFQ99732 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LITAFQ99732 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.54□□□□□ -0.08
LITAFQ99732 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LITAFQ99732 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
LITAFQ99732 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.54□□□□□ -0.08
LITAFQ99732 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.54□□□□□ -0.08
LITAFQ99732 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LITAFQ99732 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.54□□□□□ -0.08
LITAFQ99732 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LITAFQ99732 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.53□□□□□ -0.08
LITAFQ99732 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.53□□□□□ -0.08
LITAFQ99732 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LITAFQ99732 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.53□□□□□ -0.08
LITAFQ99732 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LITAFQ99732 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.53□□□□□ -0.08
LITAFQ99732 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LITAFQ99732 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LITAFQ99732 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LITAFQ99732 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LITAFQ99732 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.52□□□□□ -0.08
LITAFQ99732 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LITAFQ99732 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LITAFQ99732 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.52□□□□□ -0.08
LITAFQ99732 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LITAFQ99732 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LITAFQ99732 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC14.52□□□□□ -0.09
LITAFQ99732 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LITAFQ99732 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.52□□□□□ -0.09
LITAFQ99732 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LITAFQ99732 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.52□□□□□ -0.09
LITAFQ99732 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms