Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 AF106564.1-201ENST00000607058 2553 ntBASIC16.63■□□□□ 0.25
LINC00479Q96M42 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 LINC01960-201ENST00000563759 1884 ntBASIC16.63■□□□□ 0.25
LINC00479Q96M42 AC244015.2-201ENST00000616358 1861 ntBASIC16.63■□□□□ 0.25
LINC00479Q96M42 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00479Q96M42 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00479Q96M42 AL157384.1-201ENST00000445995 2473 ntBASIC16.62■□□□□ 0.25
LINC00479Q96M42 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LINC00479Q96M42 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00479Q96M42 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC00479Q96M42 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.62■□□□□ 0.25
LINC00479Q96M42 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LINC00479Q96M42 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LINC00479Q96M42 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LINC00479Q96M42 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00479Q96M42 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00479Q96M42 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00479Q96M42 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00479Q96M42 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LINC00479Q96M42 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LINC00479Q96M42 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.61■□□□□ 0.25
LINC00479Q96M42 AC019171.1-201ENST00000601251 1056 ntBASIC16.61■□□□□ 0.25
LINC00479Q96M42 U85056.1-201ENST00000616429 682 ntBASIC16.61■□□□□ 0.25
LINC00479Q96M42 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LINC00479Q96M42 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC00479Q96M42 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC00479Q96M42 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.6■□□□□ 0.25
LINC00479Q96M42 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LINC00479Q96M42 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC00479Q96M42 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 MIR4281-201ENST00000580852 62 ntBASIC16.59■□□□□ 0.25
LINC00479Q96M42 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC00479Q96M42 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
LINC00479Q96M42 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms