Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
EFCAB3Q8N7B9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 ZNRF2P3-201ENST00000424200 374 ntBASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
EFCAB3Q8N7B9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 PKD1P6-201ENST00000343738 4769 ntBASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 AC104564.3-201ENST00000582367 638 ntBASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 AC106739.1-201ENST00000617035 715 ntBASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 AC005703.6-201ENST00000623265 1329 ntBASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
EFCAB3Q8N7B9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 AC139530.1-201ENST00000575312 1977 ntBASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 AL512631.2-201ENST00000604634 923 ntBASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 MIR5787-201ENST00000611784 55 ntBASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EFCAB3Q8N7B9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 ESRRAP2-201ENST00000418437 1549 ntBASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
EFCAB3Q8N7B9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
EFCAB3Q8N7B9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EFCAB3Q8N7B9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 C11orf96-202ENST00000528572 1834 ntBASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EFCAB3Q8N7B9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EFCAB3Q8N7B9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms