Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
WNT3AP56704 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
WNT3AP56704 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
WNT3AP56704 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 SLC47A1P1-202ENST00000449666 945 ntBASIC22.09■■□□□ 1.13
WNT3AP56704 MIR4767-201ENST00000582827 78 ntBASIC22.09■■□□□ 1.13
WNT3AP56704 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
WNT3AP56704 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
WNT3AP56704 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.09■■□□□ 1.13
WNT3AP56704 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.09■■□□□ 1.13
WNT3AP56704 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
WNT3AP56704 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
WNT3AP56704 AC139530.1-201ENST00000575312 1977 ntBASIC22.08■■□□□ 1.13
WNT3AP56704 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
WNT3AP56704 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
WNT3AP56704 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.08■■□□□ 1.13
WNT3AP56704 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
WNT3AP56704 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.08■■□□□ 1.13
WNT3AP56704 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.08■■□□□ 1.13
WNT3AP56704 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
WNT3AP56704 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
WNT3AP56704 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
WNT3AP56704 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
WNT3AP56704 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
WNT3AP56704 AC079834.2-201ENST00000609776 1949 ntBASIC22.08■■□□□ 1.12
WNT3AP56704 AC135279.3-201ENST00000610945 1311 ntBASIC22.07■■□□□ 1.12
WNT3AP56704 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
WNT3AP56704 LINC00526-201ENST00000581067 1875 ntBASIC22.07■■□□□ 1.12
WNT3AP56704 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.07■■□□□ 1.12
WNT3AP56704 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.07■■□□□ 1.12
WNT3AP56704 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
WNT3AP56704 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
WNT3AP56704 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
WNT3AP56704 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.07■■□□□ 1.12
WNT3AP56704 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.07■■□□□ 1.12
WNT3AP56704 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
WNT3AP56704 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.07■■□□□ 1.12
WNT3AP56704 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
WNT3AP56704 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
WNT3AP56704 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.06■■□□□ 1.12
WNT3AP56704 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
WNT3AP56704 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.06■■□□□ 1.12
WNT3AP56704 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
WNT3AP56704 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.06■■□□□ 1.12
WNT3AP56704 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.06■■□□□ 1.12
WNT3AP56704 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
WNT3AP56704 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.06■■□□□ 1.12
WNT3AP56704 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
WNT3AP56704 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
WNT3AP56704 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
WNT3AP56704 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
WNT3AP56704 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
WNT3AP56704 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
WNT3AP56704 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
WNT3AP56704 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
WNT3AP56704 PBX2P1-201ENST00000493219 1291 ntBASIC22.05■■□□□ 1.12
WNT3AP56704 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.05■■□□□ 1.12
WNT3AP56704 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.05■■□□□ 1.12
WNT3AP56704 AC068587.7-201ENST00000641602 218 ntBASIC22.05■■□□□ 1.12
WNT3AP56704 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
WNT3AP56704 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
WNT3AP56704 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.04■■□□□ 1.12
WNT3AP56704 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
WNT3AP56704 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.04■■□□□ 1.12
WNT3AP56704 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.04■■□□□ 1.12
WNT3AP56704 AC110285.6-201ENST00000617652 491 ntBASIC22.04■■□□□ 1.12
WNT3AP56704 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.04■■□□□ 1.12
WNT3AP56704 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.04■■□□□ 1.12
WNT3AP56704 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
WNT3AP56704 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.03■■□□□ 1.12
WNT3AP56704 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
WNT3AP56704 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
WNT3AP56704 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
WNT3AP56704 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
WNT3AP56704 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.03■■□□□ 1.12
WNT3AP56704 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.03■■□□□ 1.12
WNT3AP56704 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
WNT3AP56704 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
WNT3AP56704 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.02■■□□□ 1.12
WNT3AP56704 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
WNT3AP56704 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.02■■□□□ 1.12
WNT3AP56704 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.02■■□□□ 1.12
WNT3AP56704 AC106739.1-201ENST00000617035 715 ntBASIC22.02■■□□□ 1.12
WNT3AP56704 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms