Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)6.14□□□□□ -1.432e-8■■■□□ 18.9
CSTF2P33240 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.044e-7■■■□□ 18.9
CSTF2P33240 SMYD3-207ENST00000462422 971 ntTSL 512.58□□□□□ -0.44e-7■■■□□ 18.9
CSTF2P33240 SMYD3-216ENST00000492487 634 ntTSL 38.02□□□□□ -1.134e-7■■■□□ 18.9
CSTF2P33240 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.63□□□□□ -1.194e-7■■■□□ 18.9
CSTF2P33240 SMYD3-205ENST00000453676 562 ntTSL 43.69□□□□□ -1.824e-7■■■□□ 18.9
CSTF2P33240 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.652e-6■■■□□ 18.9
CSTF2P33240 AGAP1-214ENST00000635100 2478 ntTSL 514.54□□□□□ -0.082e-6■■■□□ 18.9
CSTF2P33240 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.051e-7■■■□□ 18.9
CSTF2P33240 FTH1-206ENST00000530019 550 ntTSL 415.36■□□□□ 0.051e-7■■■□□ 18.9
CSTF2P33240 FTH1-205ENST00000529631 507 ntTSL 4 BASIC12.43□□□□□ -0.421e-7■■■□□ 18.9
CSTF2P33240 FTH1-203ENST00000529191 530 ntTSL 2 BASIC11.02□□□□□ -0.651e-7■■■□□ 18.9
CSTF2P33240 SOX5-204ENST00000441133 638 ntTSL 2 BASIC11.14□□□□□ -0.632e-6■■■□□ 18.9
CSTF2P33240 SOX5-211ENST00000538083 617 ntTSL 48.79□□□□□ -12e-6■■■□□ 18.9
CSTF2P33240 SOX5-213ENST00000541847 758 ntTSL 3 BASIC8.79□□□□□ -12e-6■■■□□ 18.9
CSTF2P33240 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.37□□□□□ -0.112e-7■■■□□ 18.9
CSTF2P33240 CCDC144NL-AS1-205ENST00000439794 481 ntTSL 314.37□□□□□ -0.112e-7■■■□□ 18.9
CSTF2P33240 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.571e-6■■■□□ 18.9
CSTF2P33240 AC018630.6-201ENST00000536668 1618 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.761e-6■■■□□ 18.9
CSTF2P33240 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.093e-7■■■□□ 18.9
CSTF2P33240 NRIP1-207ENST00000638122 543 ntTSL 1 (best)11.79□□□□□ -0.523e-7■■■□□ 18.9
CSTF2P33240 NRIP1-202ENST00000400199 7562 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.733e-7■■■□□ 18.9
CSTF2P33240 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.793e-7■■■□□ 18.9
CSTF2P33240 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.891e-6■■■□□ 18.9
CSTF2P33240 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.54■■□□□ 1.681e-6■■■□□ 18.9
CSTF2P33240 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.081e-6■■■□□ 18.9
CSTF2P33240 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.89■□□□□ 0.771e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.89■□□□□ 0.771e-6■■■□□ 18.9
CSTF2P33240 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.741e-6■■■□□ 18.9
CSTF2P33240 APTX-229ENST00000489583 397 ntTSL 319.45■□□□□ 0.71e-6■■■□□ 18.9
CSTF2P33240 APTX-218ENST00000473270 645 ntTSL 219.45■□□□□ 0.71e-6■■■□□ 18.9
CSTF2P33240 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.681e-6■■■□□ 18.9
CSTF2P33240 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.61e-6■■■□□ 18.9
CSTF2P33240 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.24■□□□□ 0.515e-6■■■□□ 18.9
CSTF2P33240 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.461e-6■■■□□ 18.9
CSTF2P33240 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.7■□□□□ 0.421e-6■■■□□ 18.9
CSTF2P33240 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.371e-6■■■□□ 18.9
CSTF2P33240 APTX-232ENST00000495360 1313 ntTSL 517.06■□□□□ 0.321e-6■■■□□ 18.9
CSTF2P33240 APTX-210ENST00000460945 542 ntTSL 416.25■□□□□ 0.191e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.15■□□□□ 0.021e-6■■■□□ 18.9
CSTF2P33240 PECR-207ENST00000487318 742 ntTSL 514.92□□□□□ -0.021e-6■■■□□ 18.9
CSTF2P33240 PECR-208ENST00000497889 824 ntTSL 514.78□□□□□ -0.041e-6■■■□□ 18.9
CSTF2P33240 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.061e-6■■■□□ 18.9
CSTF2P33240 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.141e-6■■■□□ 18.9
CSTF2P33240 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.08□□□□□ -0.161e-6■■■□□ 18.9
CSTF2P33240 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.04□□□□□ -0.161e-6■■■□□ 18.9
CSTF2P33240 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.191e-6■■■□□ 18.9
CSTF2P33240 AC025165.3-203ENST00000546504 373 ntAPPRIS P1 TSL 213.84□□□□□ -0.191e-6■■■□□ 18.9
CSTF2P33240 PECR-206ENST00000474093 585 ntTSL 213.56□□□□□ -0.241e-6■■■□□ 18.9
CSTF2P33240 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.421e-6■■■□□ 18.9
CSTF2P33240 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.491e-6■■■□□ 18.9
CSTF2P33240 AC025165.3-202ENST00000553083 332 ntTSL 211.6□□□□□ -0.551e-6■■■□□ 18.9
CSTF2P33240 AC011462.1-201ENST00000604424 567 ntTSL 411.25□□□□□ -0.615e-6■■■□□ 18.9
CSTF2P33240 TMEM91-214ENST00000604123 757 ntTSL 3 BASIC11.2□□□□□ -0.625e-6■■■□□ 18.9
CSTF2P33240 TMEM91-204ENST00000413014 650 ntTSL 2 BASIC10.92□□□□□ -0.665e-6■■■□□ 18.9
CSTF2P33240 RBM26-201ENST00000267229 3624 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.891e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC9.31□□□□□ -0.921e-6■■■□□ 18.9
CSTF2P33240 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.931e-12■■■□□ 18.9
CSTF2P33240 PRELID2-208ENST00000515161 419 ntTSL 38.8□□□□□ -11e-6■■■□□ 18.9
CSTF2P33240 BRAF-205ENST00000497784 2336 ntTSL 58.79□□□□□ -11e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-208ENST00000555814 583 ntTSL 48.33□□□□□ -1.081e-6■■■□□ 18.9
CSTF2P33240 PRELID2-206ENST00000510594 552 ntTSL 38□□□□□ -1.131e-6■■■□□ 18.9
CSTF2P33240 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.171e-6■■■□□ 18.9
CSTF2P33240 PECR-204ENST00000464722 640 ntTSL 45.99□□□□□ -1.451e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.611e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.651e-6■■■□□ 18.9
CSTF2P33240 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.711e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-207ENST00000554090 543 ntTSL 53.47□□□□□ -1.851e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.991e-6■■■□□ 18.9
CSTF2P33240 ARHGAP5-209ENST00000556191 654 ntTSL 42.02□□□□□ -2.091e-6■■■□□ 18.9
CSTF2P33240 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.11e-6■■■□□ 18.9
CSTF2P33240 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.532e-6■■■□□ 18.8
CSTF2P33240 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC10.72□□□□□ -0.692e-6■■■□□ 18.8
CSTF2P33240 DCBLD1-210ENST00000533453 3584 ntTSL 1 (best)5.48□□□□□ -1.532e-6■■■□□ 18.8
CSTF2P33240 SIK3-211ENST00000485363 764 ntTSL 1 (best)15.69■□□□□ 0.13e-6■■■□□ 18.8
CSTF2P33240 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.767e-7■■■□□ 18.8
CSTF2P33240 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.517e-7■■■□□ 18.8
CSTF2P33240 GMDS-201ENST00000380805 1743 ntTSL 217.81■□□□□ 0.446e-7■■■□□ 18.8
CSTF2P33240 GMDS-209ENST00000531690 515 ntTSL 55.98□□□□□ -1.456e-7■■■□□ 18.8
CSTF2P33240 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.133e-7■■■□□ 18.8
CSTF2P33240 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.123e-7■■■□□ 18.8
CSTF2P33240 E2F5-201ENST00000256117 5042 ntTSL 57.83□□□□□ -1.163e-7■■■□□ 18.8
CSTF2P33240 ARID1B-201ENST00000319584 2199 ntTSL 212.01□□□□□ -0.491e-6■■■□□ 18.8
CSTF2P33240 ARID1B-206ENST00000452544 4443 ntTSL 27.21□□□□□ -1.251e-6■■■□□ 18.8
CSTF2P33240 ARID1B-231ENST00000637887 1468 ntTSL 55.67□□□□□ -1.51e-6■■■□□ 18.8
CSTF2P33240 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC12.98□□□□□ -0.332e-10■■■□□ 18.8
CSTF2P33240 SRP54-AS1-205ENST00000636540 565 ntBASIC10.83□□□□□ -0.682e-10■■■□□ 18.8
CSTF2P33240 SRP54-AS1-201ENST00000554945 600 ntTSL 39.37□□□□□ -0.912e-10■■■□□ 18.8
CSTF2P33240 SOS1-204ENST00000451331 579 ntTSL 415.94■□□□□ 0.142e-6■■■□□ 18.8
CSTF2P33240 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.25■□□□□ 0.834e-7■■■□□ 18.8
CSTF2P33240 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.144e-7■■■□□ 18.8
CSTF2P33240 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC9.09□□□□□ -0.954e-7■■■□□ 18.8
CSTF2P33240 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.414e-7■■■□□ 18.8
CSTF2P33240 ZNF644-205ENST00000467231 851 ntTSL 32.39□□□□□ -2.034e-7■■■□□ 18.8
CSTF2P33240 HMBOX1-209ENST00000522468 817 ntTSL 313.93□□□□□ -0.186e-8■■■□□ 18.8
CSTF2P33240 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.052e-8■■■□□ 18.8
CSTF2P33240 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.58□□□□□ -1.24e-6■■■□□ 18.8
CSTF2P33240 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.74■□□□□ 0.432e-6■■■□□ 18.8
CSTF2P33240 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.63□□□□□ -1.192e-6■■■□□ 18.8
CSTF2P33240 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.342e-6■■■□□ 18.8
Retrieved 100 of 6,735 protein–RNA pairs in 62.5 ms