Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCL1P09341 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CXCL1P09341 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL1P09341 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL1P09341 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.91■□□□□ 0.3
CXCL1P09341 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CXCL1P09341 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCL1P09341 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCL1P09341 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.9■□□□□ 0.3
CXCL1P09341 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.9■□□□□ 0.3
CXCL1P09341 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CXCL1P09341 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CXCL1P09341 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CXCL1P09341 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.89■□□□□ 0.3
CXCL1P09341 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CXCL1P09341 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL1P09341 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL1P09341 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.89■□□□□ 0.29
CXCL1P09341 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL1P09341 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL1P09341 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.89■□□□□ 0.29
CXCL1P09341 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CXCL1P09341 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL1P09341 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CXCL1P09341 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CXCL1P09341 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.88■□□□□ 0.29
CXCL1P09341 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CXCL1P09341 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CXCL1P09341 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCL1P09341 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CXCL1P09341 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCL1P09341 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CXCL1P09341 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL1P09341 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CXCL1P09341 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
CXCL1P09341 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CXCL1P09341 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 AC007029.1-201ENST00000604183 313 ntBASIC16.87■□□□□ 0.29
CXCL1P09341 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CXCL1P09341 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL1P09341 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CXCL1P09341 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CXCL1P09341 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCL1P09341 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCL1P09341 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CXCL1P09341 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.86■□□□□ 0.29
CXCL1P09341 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL1P09341 RAP2CP1-202ENST00000605179 643 ntBASIC16.86■□□□□ 0.29
CXCL1P09341 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCL1P09341 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CXCL1P09341 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CXCL1P09341 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCL1P09341 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms