Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 MIR3181-201ENST00000578512 73 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 pRNA.6-201ENST00000610482 90 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CA15P2-201ENST00000611168 834 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 pRNA.5-201ENST00000612139 90 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 pRNA.11-201ENST00000618423 90 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 pRNA.13-201ENST00000619112 90 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC136469.2-201ENST00000623944 1028 ntBASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TCRBV4S1A1TA0A5B7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRBV4S1A1TA0A5B7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC099791.1-201ENST00000416440 715 ntBASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRBV4S1A1TA0A5B7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRBV4S1A1TA0A5B7 PKD1P6-201ENST00000343738 4769 ntBASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 RARRES2P6-201ENST00000567333 442 ntBASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC137767.1-201ENST00000602918 1920 ntBASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRBV4S1A1TA0A5B7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AC233992.3-201ENST00000607491 485 ntBASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 AL353803.4-201ENST00000565882 1934 ntBASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRBV4S1A1TA0A5B7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV4S1A1TA0A5B7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV4S1A1TA0A5B7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TCRBV4S1A1TA0A5B7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRBV4S1A1TA0A5B7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms