Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAV5A0A0B4J249 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 TSPY13P-201ENST00000338964 914 ntBASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV5A0A0B4J249 FP325331.1-202ENST00000623531 1380 ntBASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 MIR4508-201ENST00000584178 70 ntBASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV5A0A0B4J249 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV5A0A0B4J249 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV5A0A0B4J249 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV5A0A0B4J249 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV5A0A0B4J249 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 KRT8P33-201ENST00000508125 1423 ntBASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRAV5A0A0B4J249 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms