Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 AC087239.1-201ENST00000622671 572 ntBASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV2A0A0B4J234 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
TRAV2A0A0B4J234 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV2A0A0B4J234 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV2A0A0B4J234 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 LINC01960-201ENST00000563759 1884 ntBASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAV2A0A0B4J234 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 CA15P2-201ENST00000611168 834 ntBASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV2A0A0B4J234 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 AC127496.7-201ENST00000625110 1798 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 BX842568.3-201ENST00000418104 571 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 AC096631.2-201ENST00000436136 790 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 AP005435.1-201ENST00000529293 1178 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 AC133561.4-201ENST00000566112 224 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 AC106739.1-201ENST00000617035 715 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 CLDN5-201ENST00000403084 2357 ntBASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV2A0A0B4J234 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 EDA-201ENST00000338901 1233 ntBASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 AC024257.2-201ENST00000549699 147 ntBASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 MIR4767-201ENST00000582827 78 ntBASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV2A0A0B4J234 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms