Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 AC139795.1-202ENST00000500444 432 ntBASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV18A0A075B6X5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 MIR4281-201ENST00000580852 62 ntBASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV18A0A075B6X5 LINC01960-201ENST00000563759 1884 ntBASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 U85056.1-201ENST00000616429 682 ntBASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV18A0A075B6X5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRAV18A0A075B6X5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.71■□□□□ 0.58
TRAV18A0A075B6X5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TRAV18A0A075B6X5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 AC244015.2-201ENST00000616358 1861 ntBASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 AC073130.3-201ENST00000624389 2278 ntBASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRAV18A0A075B6X5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 LINC01529-204ENST00000636474 1715 ntBASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 THA1P-201ENST00000590384 1145 ntBASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV18A0A075B6X5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms