Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 PLP2-201ENST00000376322 620 ntTSL 2 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 APTX-203ENST00000379813 1121 ntTSL 5 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AKR1C5P-201ENST00000427165 609 ntBASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AC098934.2-202ENST00000438944 1033 ntBASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AL355309.1-201ENST00000442158 78 ntBASIC12.71□□□□□ -0.37
NCDNQ9UBB6 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 IGHV3-60-201ENST00000521678 354 ntBASIC12.71□□□□□ -0.37
NCDNQ9UBB6 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 RHOJ-202ENST00000555125 548 ntTSL 2 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AL031058.1-201ENST00000561592 888 ntBASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.71□□□□□ -0.37
NCDNQ9UBB6 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 AC004899.2-201ENST00000622993 3860 ntBASIC12.71□□□□□ -0.38
NCDNQ9UBB6 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NCDNQ9UBB6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 FKBP4P7-201ENST00000433874 1363 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 ABCD1P2-201ENST00000429313 1601 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 HAND2-204ENST00000621866 1337 ntTSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 HNRNPA1P19-201ENST00000405292 370 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 KRT18P39-201ENST00000415349 1299 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC011890.1-201ENST00000427955 303 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AL049597.1-201ENST00000447415 555 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 EEF1DP8-201ENST00000534760 536 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 CLPP-204ENST00000596149 745 ntTSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC026304.1-201ENST00000597953 561 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AL355353.1-201ENST00000604014 330 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC135506.1-201ENST00000603877 1799 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 MKRN5P-201ENST00000445263 1467 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AL355102.3-201ENST00000554299 1678 ntBASIC12.7□□□□□ -0.38
NCDNQ9UBB6 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NCDNQ9UBB6 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms