Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC12.19□□□□□ -0.46
CLK1P49759 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CLK1P49759 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
CLK1P49759 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 AC241952.1-201ENST00000612480 6897 ntBASIC12.18□□□□□ -0.46
CLK1P49759 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CLK1P49759 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.18□□□□□ -0.46
CLK1P49759 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.18□□□□□ -0.46
CLK1P49759 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 PSAT1P2-201ENST00000426107 972 ntBASIC12.18□□□□□ -0.46
CLK1P49759 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.18□□□□□ -0.46
CLK1P49759 FAM213AP2-201ENST00000521579 683 ntBASIC12.18□□□□□ -0.46
CLK1P49759 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.18□□□□□ -0.46
CLK1P49759 MIR4649-201ENST00000582839 64 ntBASIC12.18□□□□□ -0.46
CLK1P49759 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.18□□□□□ -0.46
CLK1P49759 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.18□□□□□ -0.46
CLK1P49759 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 AC026304.1-201ENST00000597953 561 ntBASIC12.18□□□□□ -0.46
CLK1P49759 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.18□□□□□ -0.46
CLK1P49759 C2orf27AP1-201ENST00000618128 586 ntBASIC12.18□□□□□ -0.46
CLK1P49759 AC073911.3-201ENST00000624401 631 ntBASIC12.18□□□□□ -0.46
CLK1P49759 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CLK1P49759 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC12.18□□□□□ -0.46
CLK1P49759 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC12.18□□□□□ -0.46
CLK1P49759 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.18□□□□□ -0.46
CLK1P49759 AL031587.5-201ENST00000624344 1849 ntBASIC12.18□□□□□ -0.46
CLK1P49759 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLK1P49759 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CLK1P49759 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CLK1P49759 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 AC106820.4-201ENST00000561847 5616 ntBASIC12.17□□□□□ -0.46
CLK1P49759 OLFML2B-201ENST00000294794 3160 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12.17□□□□□ -0.46
CLK1P49759 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 SNORD23-201ENST00000408876 110 ntBASIC12.17□□□□□ -0.46
CLK1P49759 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.17□□□□□ -0.46
CLK1P49759 FAM21EP-201ENST00000417804 985 ntBASIC12.17□□□□□ -0.46
CLK1P49759 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.17□□□□□ -0.46
CLK1P49759 AC069218.1-201ENST00000435269 762 ntBASIC12.17□□□□□ -0.46
CLK1P49759 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.17□□□□□ -0.46
CLK1P49759 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 AC018463.1-201ENST00000456674 917 ntBASIC12.17□□□□□ -0.46
CLK1P49759 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.17□□□□□ -0.46
CLK1P49759 AC008026.2-201ENST00000495438 348 ntBASIC12.17□□□□□ -0.46
CLK1P49759 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC12.17□□□□□ -0.46
CLK1P49759 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.17□□□□□ -0.46
CLK1P49759 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.17□□□□□ -0.46
CLK1P49759 RN7SL134P-201ENST00000579756 303 ntBASIC12.17□□□□□ -0.46
CLK1P49759 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 AL136982.5-201ENST00000605222 294 ntBASIC12.17□□□□□ -0.46
CLK1P49759 AP000553.2-201ENST00000609038 441 ntBASIC12.17□□□□□ -0.46
CLK1P49759 MIR6858-201ENST00000620733 67 ntBASIC12.17□□□□□ -0.46
CLK1P49759 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLK1P49759 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms