Protein–RNA interactions for Protein: S4R3F8

Uncharacterized protein, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3F8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
S4R3F8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC11.04□□□□□ -0.64
S4R3F8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
S4R3F8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
S4R3F8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
S4R3F8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
S4R3F8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
S4R3F8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
S4R3F8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC11.04□□□□□ -0.64
S4R3F8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
S4R3F8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
S4R3F8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC11.03□□□□□ -0.64
S4R3F8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
S4R3F8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC11.03□□□□□ -0.64
S4R3F8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC11.03□□□□□ -0.64
S4R3F8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC11.03□□□□□ -0.64
S4R3F8 ATP5G2P3-201ENST00000429083 425 ntBASIC11.03□□□□□ -0.64
S4R3F8 AC010980.1-201ENST00000587192 1142 ntBASIC11.03□□□□□ -0.64
S4R3F8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC11.03□□□□□ -0.64
S4R3F8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
S4R3F8 REST-206ENST00000612429 1376 ntTSL 5 BASIC11.03□□□□□ -0.64
S4R3F8 REST-207ENST00000616975 1370 ntTSL 5 BASIC11.03□□□□□ -0.64
S4R3F8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
S4R3F8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
S4R3F8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
S4R3F8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
S4R3F8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
S4R3F8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
S4R3F8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC11.02□□□□□ -0.64
S4R3F8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
S4R3F8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
S4R3F8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 TSPY13P-201ENST00000338964 914 ntBASIC11.02□□□□□ -0.65
S4R3F8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC11.02□□□□□ -0.65
S4R3F8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC11.02□□□□□ -0.65
S4R3F8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC11.02□□□□□ -0.65
S4R3F8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC11.02□□□□□ -0.65
S4R3F8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
S4R3F8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC11.02□□□□□ -0.65
S4R3F8 AC144652.1-201ENST00000609974 1624 ntBASIC11.02□□□□□ -0.65
S4R3F8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC11.02□□□□□ -0.65
S4R3F8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 AC137767.1-201ENST00000602918 1920 ntBASIC11.01□□□□□ -0.65
S4R3F8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
S4R3F8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
S4R3F8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 AC092053.2-201ENST00000640557 1818 ntBASIC11.01□□□□□ -0.65
S4R3F8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC11.01□□□□□ -0.65
S4R3F8 AC004987.1-201ENST00000428627 508 ntBASIC11.01□□□□□ -0.65
S4R3F8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC11.01□□□□□ -0.65
S4R3F8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC11.01□□□□□ -0.65
S4R3F8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
S4R3F8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC11.01□□□□□ -0.65
S4R3F8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
S4R3F8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms