Protein–RNA interactions for Protein: Q9Y679

AUP1, Ancient ubiquitous protein 1, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1Q9Y679 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AUP1Q9Y679 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AUP1Q9Y679 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AUP1Q9Y679 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
AUP1Q9Y679 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
AUP1Q9Y679 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AUP1Q9Y679 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.88■□□□□ 0.61
AUP1Q9Y679 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.88■□□□□ 0.61
AUP1Q9Y679 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AUP1Q9Y679 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AUP1Q9Y679 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.88■□□□□ 0.61
AUP1Q9Y679 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
AUP1Q9Y679 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
AUP1Q9Y679 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.88■□□□□ 0.61
AUP1Q9Y679 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.88■□□□□ 0.61
AUP1Q9Y679 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
AUP1Q9Y679 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
AUP1Q9Y679 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
AUP1Q9Y679 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.87■□□□□ 0.61
AUP1Q9Y679 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.87■□□□□ 0.61
AUP1Q9Y679 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
AUP1Q9Y679 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.87■□□□□ 0.61
AUP1Q9Y679 AC110285.6-201ENST00000617652 491 ntBASIC18.87■□□□□ 0.61
AUP1Q9Y679 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 SRD5A1P1-201ENST00000442297 786 ntBASIC18.86■□□□□ 0.61
AUP1Q9Y679 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
AUP1Q9Y679 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 AC242852.2-201ENST00000615738 1807 ntBASIC18.86■□□□□ 0.61
AUP1Q9Y679 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AUP1Q9Y679 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AUP1Q9Y679 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AUP1Q9Y679 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AUP1Q9Y679 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.85■□□□□ 0.61
AUP1Q9Y679 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
AUP1Q9Y679 AL022069.1-201ENST00000568025 1636 ntBASIC18.85■□□□□ 0.61
AUP1Q9Y679 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AUP1Q9Y679 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AUP1Q9Y679 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.84■□□□□ 0.61
AUP1Q9Y679 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AUP1Q9Y679 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 AC131274.2-201ENST00000580697 1507 ntBASIC18.84■□□□□ 0.61
AUP1Q9Y679 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AUP1Q9Y679 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AUP1Q9Y679 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.83■□□□□ 0.61
AUP1Q9Y679 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.83■□□□□ 0.61
AUP1Q9Y679 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AUP1Q9Y679 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
AUP1Q9Y679 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AUP1Q9Y679 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AUP1Q9Y679 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AUP1Q9Y679 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AUP1Q9Y679 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.83■□□□□ 0.6
AUP1Q9Y679 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.83■□□□□ 0.6
AUP1Q9Y679 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.83■□□□□ 0.6
AUP1Q9Y679 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
AUP1Q9Y679 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AUP1Q9Y679 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AUP1Q9Y679 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AUP1Q9Y679 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AUP1Q9Y679 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AUP1Q9Y679 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AUP1Q9Y679 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.82■□□□□ 0.6
AUP1Q9Y679 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.82■□□□□ 0.6
AUP1Q9Y679 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.82■□□□□ 0.6
AUP1Q9Y679 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.82■□□□□ 0.6
AUP1Q9Y679 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms