Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 UNC93B8-201ENST00000511903 705 ntBASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCM2LQ9NUG4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCM2LQ9NUG4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CCM2LQ9NUG4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.77■□□□□ 0.91
CCM2LQ9NUG4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCM2LQ9NUG4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCM2LQ9NUG4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 AL139246.5-201ENST00000606645 996 ntBASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCM2LQ9NUG4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.74■□□□□ 0.91
CCM2LQ9NUG4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 AC005229.4-201ENST00000610085 2198 ntBASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 PKD1P6-201ENST00000343738 4769 ntBASIC20.73■□□□□ 0.91
CCM2LQ9NUG4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCM2LQ9NUG4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 AC073130.3-201ENST00000624389 2278 ntBASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms