Protein–RNA interactions for Protein: Q9H9J2

MRPL44, 39S ribosomal protein L44, mitochondrial, humanhuman

Known RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL44Q9H9J2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.45■■□□□ 1.5
MRPL44Q9H9J2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
MRPL44Q9H9J2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
MRPL44Q9H9J2 SYT6-210ENST00000641643 1587 ntBASIC24.45■■□□□ 1.5
MRPL44Q9H9J2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
MRPL44Q9H9J2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 AC133637.1-201ENST00000624115 1537 ntBASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.43■■□□□ 1.5
MRPL44Q9H9J2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 SERBP1P1-201ENST00000396021 1160 ntBASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.42■■□□□ 1.5
MRPL44Q9H9J2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 AC007375.3-201ENST00000600936 2314 ntBASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 AC127496.7-201ENST00000625110 1798 ntBASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
MRPL44Q9H9J2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
MRPL44Q9H9J2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
MRPL44Q9H9J2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
MRPL44Q9H9J2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
MRPL44Q9H9J2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
MRPL44Q9H9J2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MRPL44Q9H9J2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
MRPL44Q9H9J2 AC137767.1-201ENST00000602918 1920 ntBASIC24.37■■□□□ 1.49
MRPL44Q9H9J2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MRPL44Q9H9J2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
MRPL44Q9H9J2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms