Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
SCAF1Q9H7N4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC32.38■■■□□ 2.77
SCAF1Q9H7N4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC32.37■■■□□ 2.77
SCAF1Q9H7N4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF1Q9H7N4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF1Q9H7N4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF1Q9H7N4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF1Q9H7N4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 AL358852.1-201ENST00000623174 1268 ntBASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SCAF1Q9H7N4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 KRT18P14-201ENST00000534205 1250 ntBASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 AL109923.1-201ENST00000618799 583 ntBASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SCAF1Q9H7N4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC32.34■■■□□ 2.77
SCAF1Q9H7N4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SCAF1Q9H7N4 RAP2CP1-201ENST00000605103 478 ntBASIC32.34■■■□□ 2.77
SCAF1Q9H7N4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC32.34■■■□□ 2.77
SCAF1Q9H7N4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SCAF1Q9H7N4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 CDCA4P2-201ENST00000441182 718 ntBASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 AC073111.5-205ENST00000641717 521 ntBASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 AC137767.1-201ENST00000602918 1920 ntBASIC32.33■■■□□ 2.77
SCAF1Q9H7N4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 PPP1R14BP3-201ENST00000509033 445 ntBASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
SCAF1Q9H7N4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 AC093827.2-201ENST00000512654 315 ntBASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SCAF1Q9H7N4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 MAP2K4P1-201ENST00000438453 1195 ntBASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.3■■■□□ 2.76
SCAF1Q9H7N4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 AC026185.1-201ENST00000445748 174 ntBASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
SCAF1Q9H7N4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 FOXO3B-201ENST00000395675 1928 ntBASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
SCAF1Q9H7N4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms