Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
COPS4Q9BT78 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 KRT18P24-201ENST00000344739 1156 ntBASIC20.02■□□□□ 0.8
COPS4Q9BT78 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COPS4Q9BT78 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COPS4Q9BT78 AC010542.4-201ENST00000563151 1910 ntBASIC20.02■□□□□ 0.79
COPS4Q9BT78 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
COPS4Q9BT78 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 AC073130.3-201ENST00000624389 2278 ntBASIC20.01■□□□□ 0.79
COPS4Q9BT78 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
COPS4Q9BT78 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.01■□□□□ 0.79
COPS4Q9BT78 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.01■□□□□ 0.79
COPS4Q9BT78 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COPS4Q9BT78 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20■□□□□ 0.79
COPS4Q9BT78 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20■□□□□ 0.79
COPS4Q9BT78 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20■□□□□ 0.79
COPS4Q9BT78 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20■□□□□ 0.79
COPS4Q9BT78 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20■□□□□ 0.79
COPS4Q9BT78 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 MIR4281-201ENST00000580852 62 ntBASIC20■□□□□ 0.79
COPS4Q9BT78 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20■□□□□ 0.79
COPS4Q9BT78 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20■□□□□ 0.79
COPS4Q9BT78 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS4Q9BT78 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.99■□□□□ 0.79
COPS4Q9BT78 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COPS4Q9BT78 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COPS4Q9BT78 AC005229.4-201ENST00000610085 2198 ntBASIC19.99■□□□□ 0.79
COPS4Q9BT78 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COPS4Q9BT78 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.99■□□□□ 0.79
COPS4Q9BT78 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COPS4Q9BT78 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
COPS4Q9BT78 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.98■□□□□ 0.79
COPS4Q9BT78 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.98■□□□□ 0.79
COPS4Q9BT78 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.98■□□□□ 0.79
COPS4Q9BT78 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COPS4Q9BT78 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.97■□□□□ 0.79
COPS4Q9BT78 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.97■□□□□ 0.79
COPS4Q9BT78 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.97■□□□□ 0.79
COPS4Q9BT78 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.97■□□□□ 0.79
COPS4Q9BT78 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COPS4Q9BT78 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 KRT8P33-201ENST00000508125 1423 ntBASIC19.96■□□□□ 0.79
COPS4Q9BT78 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 MIR4508-201ENST00000584178 70 ntBASIC19.96■□□□□ 0.79
COPS4Q9BT78 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COPS4Q9BT78 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COPS4Q9BT78 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.95■□□□□ 0.79
COPS4Q9BT78 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COPS4Q9BT78 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COPS4Q9BT78 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COPS4Q9BT78 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COPS4Q9BT78 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms