Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 AC068587.7-201ENST00000641602 218 ntBASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF440Q8IYI8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF440Q8IYI8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
ZNF440Q8IYI8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF440Q8IYI8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 MIR4466-201ENST00000606121 54 ntBASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 AC092053.2-201ENST00000640557 1818 ntBASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF440Q8IYI8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF440Q8IYI8 SYT6-210ENST00000641643 1587 ntBASIC20■□□□□ 0.79
ZNF440Q8IYI8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 OR2I1P-207ENST00000453522 948 ntBASIC20■□□□□ 0.79
ZNF440Q8IYI8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 AC131281.2-201ENST00000520478 145 ntBASIC20■□□□□ 0.79
ZNF440Q8IYI8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 AL031602.1-201ENST00000633169 911 ntBASIC20■□□□□ 0.79
ZNF440Q8IYI8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF440Q8IYI8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF440Q8IYI8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZNF440Q8IYI8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF440Q8IYI8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF440Q8IYI8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF440Q8IYI8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 AC139530.1-201ENST00000575312 1977 ntBASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 AC080038.3-201ENST00000623346 1952 ntBASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF440Q8IYI8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 AC137767.1-201ENST00000602918 1920 ntBASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF440Q8IYI8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF440Q8IYI8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms