Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NPAS4Q8IUM7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 AC026185.1-201ENST00000445748 174 ntBASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 OXCT2P1-201ENST00000447263 1535 ntBASIC23.73■■□□□ 1.39
NPAS4Q8IUM7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.72■■□□□ 1.39
NPAS4Q8IUM7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.71■■□□□ 1.39
NPAS4Q8IUM7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NPAS4Q8IUM7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 AL139125.2-201ENST00000623134 1869 ntBASIC23.7■■□□□ 1.38
NPAS4Q8IUM7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 AC079140.4-201ENST00000507448 529 ntBASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NPAS4Q8IUM7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.68■■□□□ 1.38
NPAS4Q8IUM7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 KRT18P11-201ENST00000435214 1283 ntBASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.67■■□□□ 1.38
NPAS4Q8IUM7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NPAS4Q8IUM7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 AC006970.2-201ENST00000450065 779 ntBASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NPAS4Q8IUM7 ABCB10P4-201ENST00000566803 2184 ntBASIC23.64■■□□□ 1.38
NPAS4Q8IUM7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NPAS4Q8IUM7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
NPAS4Q8IUM7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NPAS4Q8IUM7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.64■■□□□ 1.37
NPAS4Q8IUM7 AC104771.1-201ENST00000603335 964 ntBASIC23.64■■□□□ 1.37
NPAS4Q8IUM7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.64■■□□□ 1.37
NPAS4Q8IUM7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms