Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL354811.1-201ENST00000610286 706 ntBASIC20.79■□□□□ 0.92
RAB43Q86YS6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB43Q86YS6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB43Q86YS6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB43Q86YS6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB43Q86YS6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB43Q86YS6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB43Q86YS6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB43Q86YS6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAB43Q86YS6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB43Q86YS6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 AC012414.1-201ENST00000556676 535 ntBASIC20.78■□□□□ 0.92
RAB43Q86YS6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB43Q86YS6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB43Q86YS6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB43Q86YS6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RAB43Q86YS6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB43Q86YS6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB43Q86YS6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB43Q86YS6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB43Q86YS6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB43Q86YS6 AC027612.3-201ENST00000413684 1047 ntBASIC20.77■□□□□ 0.92
RAB43Q86YS6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.77■□□□□ 0.92
RAB43Q86YS6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB43Q86YS6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RAB43Q86YS6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.77■□□□□ 0.91
RAB43Q86YS6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB43Q86YS6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB43Q86YS6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB43Q86YS6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB43Q86YS6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB43Q86YS6 AC010525.1-201ENST00000585559 441 ntBASIC20.76■□□□□ 0.91
RAB43Q86YS6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB43Q86YS6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB43Q86YS6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RAB43Q86YS6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 AC123595.1-201ENST00000440769 1046 ntBASIC20.75■□□□□ 0.91
RAB43Q86YS6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 AP005435.1-201ENST00000529293 1178 ntBASIC20.75■□□□□ 0.91
RAB43Q86YS6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB43Q86YS6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB43Q86YS6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB43Q86YS6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB43Q86YS6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB43Q86YS6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB43Q86YS6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB43Q86YS6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RAB43Q86YS6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB43Q86YS6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms