Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 AC136469.2-201ENST00000623944 1028 ntBASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 AL024507.2-201ENST00000606070 2574 ntBASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHMP1BQ7LBR1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHMP1BQ7LBR1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHMP1BQ7LBR1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 DUX4L4-201ENST00000566884 1269 ntBASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHMP1BQ7LBR1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHMP1BQ7LBR1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20■□□□□ 0.79
CHMP1BQ7LBR1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHMP1BQ7LBR1 AF213884.3-201ENST00000563833 479 ntBASIC20■□□□□ 0.79
CHMP1BQ7LBR1 AC008764.7-201ENST00000593779 1081 ntBASIC20■□□□□ 0.79
CHMP1BQ7LBR1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20■□□□□ 0.79
CHMP1BQ7LBR1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 SUDS3P1-201ENST00000505831 966 ntBASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 AC027682.1-201ENST00000562846 899 ntBASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHMP1BQ7LBR1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 AC091305.1-201ENST00000479476 895 ntBASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHMP1BQ7LBR1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHMP1BQ7LBR1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms