Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 MIR4466-201ENST00000606121 54 ntBASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.12■□□□□ 0.97
DEPDC1Q5TB30 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DEPDC1Q5TB30 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 AC006455.2-201ENST00000429931 906 ntBASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 AC131281.2-201ENST00000520478 145 ntBASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DEPDC1Q5TB30 ESRRAP2-201ENST00000418437 1549 ntBASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DEPDC1Q5TB30 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 AC004687.1-201ENST00000579003 1625 ntBASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 AC092171.4-201ENST00000609130 632 ntBASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.08■□□□□ 0.97
DEPDC1Q5TB30 AC233723.2-201ENST00000623798 2106 ntBASIC21.08■□□□□ 0.96
DEPDC1Q5TB30 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
DEPDC1Q5TB30 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 pRNA.6-201ENST00000610482 90 ntBASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 pRNA.5-201ENST00000612139 90 ntBASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 pRNA.11-201ENST00000618423 90 ntBASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 pRNA.13-201ENST00000619112 90 ntBASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DEPDC1Q5TB30 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms