Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRA2BP62995 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRA2BP62995 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRA2BP62995 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TRA2BP62995 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRA2BP62995 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.71■□□□□ 0.91
TRA2BP62995 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRA2BP62995 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRA2BP62995 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRA2BP62995 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TRA2BP62995 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TRA2BP62995 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.71■□□□□ 0.91
TRA2BP62995 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.71■□□□□ 0.91
TRA2BP62995 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRA2BP62995 AC092053.2-201ENST00000640557 1818 ntBASIC20.71■□□□□ 0.91
TRA2BP62995 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.71■□□□□ 0.91
TRA2BP62995 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRA2BP62995 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRA2BP62995 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRA2BP62995 AL136116.3-201ENST00000402907 1138 ntBASIC20.7■□□□□ 0.9
TRA2BP62995 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRA2BP62995 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.7■□□□□ 0.9
TRA2BP62995 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.7■□□□□ 0.9
TRA2BP62995 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.7■□□□□ 0.9
TRA2BP62995 AC131212.1-201ENST00000613771 668 ntBASIC20.7■□□□□ 0.9
TRA2BP62995 AC136469.2-201ENST00000623944 1028 ntBASIC20.7■□□□□ 0.9
TRA2BP62995 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRA2BP62995 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRA2BP62995 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRA2BP62995 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TRA2BP62995 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRA2BP62995 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.69■□□□□ 0.9
TRA2BP62995 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRA2BP62995 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRA2BP62995 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.69■□□□□ 0.9
TRA2BP62995 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRA2BP62995 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRA2BP62995 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRA2BP62995 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRA2BP62995 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.68■□□□□ 0.9
TRA2BP62995 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRA2BP62995 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRA2BP62995 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRA2BP62995 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRA2BP62995 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRA2BP62995 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.68■□□□□ 0.9
TRA2BP62995 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
TRA2BP62995 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.67■□□□□ 0.9
TRA2BP62995 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
TRA2BP62995 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.67■□□□□ 0.9
TRA2BP62995 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
TRA2BP62995 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TRA2BP62995 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.67■□□□□ 0.9
TRA2BP62995 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.67■□□□□ 0.9
TRA2BP62995 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.67■□□□□ 0.9
TRA2BP62995 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.67■□□□□ 0.9
TRA2BP62995 EP400NL-214ENST00000641289 2402 ntBASIC20.67■□□□□ 0.9
TRA2BP62995 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRA2BP62995 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRA2BP62995 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.66■□□□□ 0.9
TRA2BP62995 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.66■□□□□ 0.9
TRA2BP62995 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRA2BP62995 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.65■□□□□ 0.9
TRA2BP62995 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRA2BP62995 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRA2BP62995 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.65■□□□□ 0.9
TRA2BP62995 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRA2BP62995 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.65■□□□□ 0.9
TRA2BP62995 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
TRA2BP62995 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.65■□□□□ 0.9
TRA2BP62995 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRA2BP62995 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.65■□□□□ 0.9
TRA2BP62995 AC087239.1-201ENST00000622671 572 ntBASIC20.65■□□□□ 0.9
TRA2BP62995 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRA2BP62995 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms