Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.04■□□□□ 0.64
SEC61A1P61619 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.04■□□□□ 0.64
SEC61A1P61619 AC092068.2-201ENST00000590491 1708 ntBASIC19.04■□□□□ 0.64
SEC61A1P61619 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SEC61A1P61619 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.04■□□□□ 0.64
SEC61A1P61619 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEC61A1P61619 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.03■□□□□ 0.64
SEC61A1P61619 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.03■□□□□ 0.64
SEC61A1P61619 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.03■□□□□ 0.64
SEC61A1P61619 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.03■□□□□ 0.64
SEC61A1P61619 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.03■□□□□ 0.64
SEC61A1P61619 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.03■□□□□ 0.64
SEC61A1P61619 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.03■□□□□ 0.64
SEC61A1P61619 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEC61A1P61619 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.03■□□□□ 0.64
SEC61A1P61619 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SEC61A1P61619 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SEC61A1P61619 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.02■□□□□ 0.64
SEC61A1P61619 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEC61A1P61619 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SEC61A1P61619 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.01■□□□□ 0.63
SEC61A1P61619 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SEC61A1P61619 AC005703.6-201ENST00000623265 1329 ntBASIC19.01■□□□□ 0.63
SEC61A1P61619 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.01■□□□□ 0.63
SEC61A1P61619 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SEC61A1P61619 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SEC61A1P61619 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.01■□□□□ 0.63
SEC61A1P61619 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SEC61A1P61619 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.01■□□□□ 0.63
SEC61A1P61619 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.01■□□□□ 0.63
SEC61A1P61619 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SEC61A1P61619 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.01■□□□□ 0.63
SEC61A1P61619 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A1P61619 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A1P61619 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19■□□□□ 0.63
SEC61A1P61619 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19■□□□□ 0.63
SEC61A1P61619 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A1P61619 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A1P61619 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A1P61619 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SEC61A1P61619 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A1P61619 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19■□□□□ 0.63
SEC61A1P61619 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SEC61A1P61619 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SEC61A1P61619 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A1P61619 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A1P61619 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A1P61619 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A1P61619 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SEC61A1P61619 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A1P61619 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC61A1P61619 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
SEC61A1P61619 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
SEC61A1P61619 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC61A1P61619 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.97■□□□□ 0.63
SEC61A1P61619 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SEC61A1P61619 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms