Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PSMD4P55036 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PSMD4P55036 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PSMD4P55036 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PSMD4P55036 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.34■□□□□ 0.85
PSMD4P55036 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PSMD4P55036 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
PSMD4P55036 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PSMD4P55036 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PSMD4P55036 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PSMD4P55036 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.33■□□□□ 0.85
PSMD4P55036 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PSMD4P55036 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PSMD4P55036 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PSMD4P55036 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PSMD4P55036 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.33■□□□□ 0.84
PSMD4P55036 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.32■□□□□ 0.84
PSMD4P55036 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.32■□□□□ 0.84
PSMD4P55036 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PSMD4P55036 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.32■□□□□ 0.84
PSMD4P55036 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PSMD4P55036 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.32■□□□□ 0.84
PSMD4P55036 AC136469.2-201ENST00000623944 1028 ntBASIC20.32■□□□□ 0.84
PSMD4P55036 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
PSMD4P55036 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PSMD4P55036 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PSMD4P55036 AC127496.7-201ENST00000625110 1798 ntBASIC20.31■□□□□ 0.84
PSMD4P55036 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD4P55036 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD4P55036 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.31■□□□□ 0.84
PSMD4P55036 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PSMD4P55036 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.31■□□□□ 0.84
PSMD4P55036 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.31■□□□□ 0.84
PSMD4P55036 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PSMD4P55036 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD4P55036 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.3■□□□□ 0.84
PSMD4P55036 AL117328.2-201ENST00000624617 1940 ntBASIC20.3■□□□□ 0.84
PSMD4P55036 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.3■□□□□ 0.84
PSMD4P55036 UNC93B3-201ENST00000308076 687 ntBASIC20.3■□□□□ 0.84
PSMD4P55036 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD4P55036 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PSMD4P55036 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.3■□□□□ 0.84
PSMD4P55036 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.3■□□□□ 0.84
PSMD4P55036 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD4P55036 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD4P55036 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD4P55036 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PSMD4P55036 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PSMD4P55036 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PSMD4P55036 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 OR2I1P-207ENST00000453522 948 ntBASIC20.29■□□□□ 0.84
PSMD4P55036 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.29■□□□□ 0.84
PSMD4P55036 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PSMD4P55036 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.29■□□□□ 0.84
PSMD4P55036 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.29■□□□□ 0.84
PSMD4P55036 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMD4P55036 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PSMD4P55036 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.28■□□□□ 0.84
PSMD4P55036 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.28■□□□□ 0.84
PSMD4P55036 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PSMD4P55036 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PSMD4P55036 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.28■□□□□ 0.84
PSMD4P55036 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.28■□□□□ 0.84
PSMD4P55036 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
PSMD4P55036 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 LINC01960-201ENST00000563759 1884 ntBASIC20.28■□□□□ 0.84
PSMD4P55036 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMD4P55036 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.27■□□□□ 0.84
PSMD4P55036 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms