Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PRRX1P54821 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRRX1P54821 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRRX1P54821 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
PRRX1P54821 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.97■□□□□ 0.47
PRRX1P54821 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRRX1P54821 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.97■□□□□ 0.47
PRRX1P54821 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PRRX1P54821 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
PRRX1P54821 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRRX1P54821 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRRX1P54821 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.96■□□□□ 0.47
PRRX1P54821 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.96■□□□□ 0.47
PRRX1P54821 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.96■□□□□ 0.47
PRRX1P54821 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.96■□□□□ 0.47
PRRX1P54821 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.96■□□□□ 0.47
PRRX1P54821 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRRX1P54821 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRRX1P54821 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRRX1P54821 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRRX1P54821 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
PRRX1P54821 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PRRX1P54821 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PRRX1P54821 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 ESRRAP2-201ENST00000418437 1549 ntBASIC17.95■□□□□ 0.46
PRRX1P54821 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.95■□□□□ 0.46
PRRX1P54821 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 AL136162.1-201ENST00000607711 1078 ntBASIC17.95■□□□□ 0.46
PRRX1P54821 AC136469.2-201ENST00000623944 1028 ntBASIC17.95■□□□□ 0.46
PRRX1P54821 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.95■□□□□ 0.46
PRRX1P54821 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PRRX1P54821 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRRX1P54821 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRRX1P54821 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PRRX1P54821 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRRX1P54821 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.94■□□□□ 0.46
PRRX1P54821 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRRX1P54821 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRRX1P54821 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PRRX1P54821 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRRX1P54821 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.94■□□□□ 0.46
PRRX1P54821 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.94■□□□□ 0.46
PRRX1P54821 C9orf163-202ENST00000624034 2573 ntBASIC17.94■□□□□ 0.46
PRRX1P54821 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PRRX1P54821 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRRX1P54821 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRRX1P54821 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRRX1P54821 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.93■□□□□ 0.46
PRRX1P54821 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PRRX1P54821 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.93■□□□□ 0.46
PRRX1P54821 AC096631.2-201ENST00000436136 790 ntBASIC17.93■□□□□ 0.46
PRRX1P54821 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.93■□□□□ 0.46
PRRX1P54821 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.93■□□□□ 0.46
PRRX1P54821 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRRX1P54821 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PRRX1P54821 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PRRX1P54821 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.92■□□□□ 0.46
PRRX1P54821 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRRX1P54821 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRRX1P54821 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRRX1P54821 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRRX1P54821 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PRRX1P54821 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.92■□□□□ 0.46
PRRX1P54821 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PRRX1P54821 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PRRX1P54821 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PRRX1P54821 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRRX1P54821 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.92■□□□□ 0.46
PRRX1P54821 AC068587.7-201ENST00000641602 218 ntBASIC17.92■□□□□ 0.46
PRRX1P54821 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms