Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.63■□□□□ 0.57
MECP2P51608 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MECP2P51608 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MECP2P51608 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MECP2P51608 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MECP2P51608 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MECP2P51608 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MECP2P51608 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.63■□□□□ 0.57
MECP2P51608 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MECP2P51608 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 LINC01521-201ENST00000504184 1943 ntBASIC18.62■□□□□ 0.57
MECP2P51608 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MECP2P51608 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MECP2P51608 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MECP2P51608 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MECP2P51608 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MECP2P51608 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MECP2P51608 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MECP2P51608 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MECP2P51608 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MECP2P51608 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.61■□□□□ 0.57
MECP2P51608 AC133552.2-201ENST00000619106 1032 ntBASIC18.61■□□□□ 0.57
MECP2P51608 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MECP2P51608 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MECP2P51608 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
MECP2P51608 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.6■□□□□ 0.57
MECP2P51608 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.6■□□□□ 0.57
MECP2P51608 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.6■□□□□ 0.57
MECP2P51608 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
MECP2P51608 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.6■□□□□ 0.57
MECP2P51608 NTF6A-201ENST00000591175 560 ntBASIC18.6■□□□□ 0.57
MECP2P51608 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
MECP2P51608 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.6■□□□□ 0.57
MECP2P51608 AC244015.2-201ENST00000616358 1861 ntBASIC18.6■□□□□ 0.57
MECP2P51608 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MECP2P51608 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
MECP2P51608 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.59■□□□□ 0.57
MECP2P51608 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.59■□□□□ 0.57
MECP2P51608 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MECP2P51608 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MECP2P51608 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MECP2P51608 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MECP2P51608 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
MECP2P51608 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
MECP2P51608 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.58■□□□□ 0.56
MECP2P51608 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.58■□□□□ 0.56
MECP2P51608 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 U85056.1-201ENST00000616429 682 ntBASIC18.58■□□□□ 0.56
MECP2P51608 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
MECP2P51608 AC009831.1-201ENST00000580420 1582 ntBASIC18.58■□□□□ 0.56
MECP2P51608 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MECP2P51608 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MECP2P51608 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MECP2P51608 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MECP2P51608 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MECP2P51608 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MECP2P51608 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MECP2P51608 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MECP2P51608 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MECP2P51608 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms