Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.69■□□□□ 0.58
TNFSF4P23510 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TNFSF4P23510 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNFSF4P23510 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFSF4P23510 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF4P23510 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF4P23510 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNFSF4P23510 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFSF4P23510 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TNFSF4P23510 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF4P23510 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF4P23510 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF4P23510 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TNFSF4P23510 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.68■□□□□ 0.58
TNFSF4P23510 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNFSF4P23510 AL136967.2-201ENST00000623968 743 ntBASIC18.68■□□□□ 0.58
TNFSF4P23510 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.68■□□□□ 0.58
TNFSF4P23510 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TNFSF4P23510 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF4P23510 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFSF4P23510 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TNFSF4P23510 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF4P23510 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF4P23510 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF4P23510 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF4P23510 AP005435.1-201ENST00000529293 1178 ntBASIC18.67■□□□□ 0.58
TNFSF4P23510 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFSF4P23510 AL031432.3-201ENST00000607698 485 ntBASIC18.67■□□□□ 0.58
TNFSF4P23510 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF4P23510 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNFSF4P23510 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.67■□□□□ 0.58
TNFSF4P23510 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFSF4P23510 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.67■□□□□ 0.58
TNFSF4P23510 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.66■□□□□ 0.58
TNFSF4P23510 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TNFSF4P23510 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.66■□□□□ 0.58
TNFSF4P23510 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.66■□□□□ 0.58
TNFSF4P23510 CA15P2-201ENST00000611168 834 ntBASIC18.66■□□□□ 0.58
TNFSF4P23510 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 AC019069.1-201ENST00000610008 1333 ntBASIC18.66■□□□□ 0.58
TNFSF4P23510 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TNFSF4P23510 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TNFSF4P23510 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TNFSF4P23510 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.65■□□□□ 0.58
TNFSF4P23510 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TNFSF4P23510 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNFSF4P23510 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFSF4P23510 AC010525.1-201ENST00000585559 441 ntBASIC18.65■□□□□ 0.58
TNFSF4P23510 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.65■□□□□ 0.58
TNFSF4P23510 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TNFSF4P23510 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFSF4P23510 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.65■□□□□ 0.58
TNFSF4P23510 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF4P23510 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF4P23510 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNFSF4P23510 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TNFSF4P23510 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.64■□□□□ 0.57
TNFSF4P23510 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TNFSF4P23510 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
TNFSF4P23510 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.64■□□□□ 0.57
TNFSF4P23510 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF4P23510 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF4P23510 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF4P23510 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFSF4P23510 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.63■□□□□ 0.57
TNFSF4P23510 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TNFSF4P23510 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFSF4P23510 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFSF4P23510 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TNFSF4P23510 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TNFSF4P23510 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF4P23510 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms