Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 AC007952.6-201ENST00000573168 2673 ntBASIC16.45■□□□□ 0.22
HLA-DQA1P01909 AC003957.1-201ENST00000625108 2673 ntBASIC16.45■□□□□ 0.22
HLA-DQA1P01909 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DQA1P01909 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HLA-DQA1P01909 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 AL157384.1-201ENST00000445995 2473 ntBASIC16.43■□□□□ 0.22
HLA-DQA1P01909 MIR3960-201ENST00000583311 91 ntBASIC16.43■□□□□ 0.22
HLA-DQA1P01909 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HLA-DQA1P01909 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 AC244015.2-201ENST00000616358 1861 ntBASIC16.42■□□□□ 0.22
HLA-DQA1P01909 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQA1P01909 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 KRT18P10-201ENST00000388836 1287 ntBASIC16.41■□□□□ 0.22
HLA-DQA1P01909 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQA1P01909 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1P01909 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms