Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 AC009831.1-201ENST00000580420 1582 ntBASIC19.81■□□□□ 0.76
CLPXO76031 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPXO76031 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.81■□□□□ 0.76
CLPXO76031 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLPXO76031 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CLPXO76031 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.8■□□□□ 0.76
CLPXO76031 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPXO76031 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLPXO76031 AC004987.1-201ENST00000428627 508 ntBASIC19.8■□□□□ 0.76
CLPXO76031 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPXO76031 AC133552.2-201ENST00000619106 1032 ntBASIC19.8■□□□□ 0.76
CLPXO76031 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPXO76031 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPXO76031 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.8■□□□□ 0.76
CLPXO76031 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLPXO76031 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPXO76031 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.79■□□□□ 0.76
CLPXO76031 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.79■□□□□ 0.76
CLPXO76031 ATP5G2P3-201ENST00000429083 425 ntBASIC19.79■□□□□ 0.76
CLPXO76031 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLPXO76031 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLPXO76031 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLPXO76031 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLPXO76031 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPXO76031 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPXO76031 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLPXO76031 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPXO76031 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.78■□□□□ 0.76
CLPXO76031 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLPXO76031 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.78■□□□□ 0.76
CLPXO76031 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPXO76031 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPXO76031 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CLPXO76031 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPXO76031 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPXO76031 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLPXO76031 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLPXO76031 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLPXO76031 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLPXO76031 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.77■□□□□ 0.76
CLPXO76031 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.77■□□□□ 0.76
CLPXO76031 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.76■□□□□ 0.75
CLPXO76031 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CLPXO76031 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.76■□□□□ 0.75
CLPXO76031 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.76■□□□□ 0.75
CLPXO76031 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLPXO76031 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.76■□□□□ 0.75
CLPXO76031 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CLPXO76031 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPXO76031 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CLPXO76031 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPXO76031 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPXO76031 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLPXO76031 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPXO76031 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLPXO76031 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.75■□□□□ 0.75
CLPXO76031 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.74■□□□□ 0.75
CLPXO76031 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.74■□□□□ 0.75
CLPXO76031 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPXO76031 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
CLPXO76031 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.73■□□□□ 0.75
CLPXO76031 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CLPXO76031 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.73■□□□□ 0.75
CLPXO76031 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLPXO76031 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms