Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.141e-5■□□□□ 8.6
EIF3DO15371 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.141e-5■□□□□ 8.6
EIF3DO15371 AC126755.1-201ENST00000525846 6405 ntBASIC15.89■□□□□ 0.134e-9■□□□□ 8.6
EIF3DO15371 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.091e-5■□□□□ 8.6
EIF3DO15371 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.071e-5■□□□□ 8.6
EIF3DO15371 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.49■□□□□ 0.071e-5■□□□□ 8.6
EIF3DO15371 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.029e-8■□□□□ 8.6
EIF3DO15371 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)15.13■□□□□ 0.012e-10■□□□□ 8.6
EIF3DO15371 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.8□□□□□ -0.042e-7■□□□□ 8.6
EIF3DO15371 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.052e-7■□□□□ 8.6
EIF3DO15371 TASP1-204ENST00000465381 993 ntTSL 514.75□□□□□ -0.051e-5■□□□□ 8.6
EIF3DO15371 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.052e-7■□□□□ 8.6
EIF3DO15371 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.64□□□□□ -0.079e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.079e-8■□□□□ 8.6
EIF3DO15371 SEC61B-202ENST00000481573 687 ntTSL 214.52□□□□□ -0.091e-5■□□□□ 8.6
EIF3DO15371 TYK2-221ENST00000592137 536 ntTSL 314.46□□□□□ -0.091e-5■□□□□ 8.6
EIF3DO15371 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.11e-5■□□□□ 8.6
EIF3DO15371 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.12e-7■□□□□ 8.6
EIF3DO15371 RNF213-215ENST00000573038 699 ntTSL 314.38□□□□□ -0.112e-7■□□□□ 8.6
EIF3DO15371 FUS-206ENST00000487509 4920 ntTSL 214.14□□□□□ -0.151e-35■□□□□ 8.6
EIF3DO15371 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.172e-10■□□□□ 8.6
EIF3DO15371 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.99□□□□□ -0.172e-10■□□□□ 8.6
EIF3DO15371 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.91□□□□□ -0.181e-5■□□□□ 8.6
EIF3DO15371 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.22e-7■□□□□ 8.6
EIF3DO15371 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.211e-5■□□□□ 8.6
EIF3DO15371 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC13.68□□□□□ -0.222e-7■□□□□ 8.6
EIF3DO15371 AL133352.1-205ENST00000533549 582 ntAPPRIS ALT2 TSL 413.58□□□□□ -0.242e-7■□□□□ 8.6
EIF3DO15371 MROH1-205ENST00000527552 5832 ntTSL 1 (best)13.28□□□□□ -0.281e-5■□□□□ 8.6
EIF3DO15371 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.311e-5■□□□□ 8.6
EIF3DO15371 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.331e-5■□□□□ 8.6
EIF3DO15371 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)12.86□□□□□ -0.352e-7■□□□□ 8.6
EIF3DO15371 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.352e-7■□□□□ 8.6
EIF3DO15371 FUS-205ENST00000487045 952 ntTSL 212.78□□□□□ -0.361e-35■□□□□ 8.6
EIF3DO15371 TYK2-215ENST00000530560 558 ntTSL 312.66□□□□□ -0.381e-5■□□□□ 8.6
EIF3DO15371 SNHG14-220ENST00000553149 513 ntTSL 5 BASIC12.62□□□□□ -0.391e-5■□□□□ 8.6
EIF3DO15371 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC12.54□□□□□ -0.42e-10■□□□□ 8.6
EIF3DO15371 TRIO-206ENST00000504606 817 ntTSL 212.51□□□□□ -0.412e-7■□□□□ 8.6
EIF3DO15371 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC12.5□□□□□ -0.411e-5■□□□□ 8.6
EIF3DO15371 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-5■□□□□ 8.6
EIF3DO15371 LRP1-209ENST00000555941 499 ntTSL 312.34□□□□□ -0.432e-7■□□□□ 8.6
EIF3DO15371 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)12.33□□□□□ -0.442e-7■□□□□ 8.6
EIF3DO15371 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.451e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-224ENST00000592701 562 ntTSL 412.14□□□□□ -0.471e-5■□□□□ 8.6
EIF3DO15371 MROH1-208ENST00000532255 3905 ntTSL 211.69□□□□□ -0.541e-5■□□□□ 8.6
EIF3DO15371 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.542e-7■□□□□ 8.6
EIF3DO15371 PPT2-EGFL8-205ENST00000479001 944 ntTSL 511.66□□□□□ -0.542e-7■□□□□ 8.6
EIF3DO15371 BRD2-218ENST00000606059 565 ntTSL 211.66□□□□□ -0.541e-23■□□□□ 8.6
EIF3DO15371 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.551e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.581e-5■□□□□ 8.6
EIF3DO15371 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC11.14□□□□□ -0.631e-5■□□□□ 8.6
EIF3DO15371 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.631e-5■□□□□ 8.6
EIF3DO15371 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC11.11□□□□□ -0.639e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.649e-8■□□□□ 8.6
EIF3DO15371 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.651e-5■□□□□ 8.6
EIF3DO15371 AL133352.1-204ENST00000528174 538 ntAPPRIS ALT2 TSL 310.72□□□□□ -0.692e-7■□□□□ 8.6
EIF3DO15371 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.722e-7■□□□□ 8.6
EIF3DO15371 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.751e-5■□□□□ 8.6
EIF3DO15371 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.771e-5■□□□□ 8.6
EIF3DO15371 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)10.22□□□□□ -0.771e-5■□□□□ 8.6
EIF3DO15371 FRAS1-206ENST00000510944 2125 ntTSL 210.14□□□□□ -0.791e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-222ENST00000592408 561 ntTSL 410.1□□□□□ -0.791e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC10.08□□□□□ -0.81e-5■□□□□ 8.6
EIF3DO15371 TASP1-203ENST00000455532 1000 ntTSL 510.06□□□□□ -0.81e-5■□□□□ 8.6
EIF3DO15371 TASP1-205ENST00000476108 829 ntTSL 510.01□□□□□ -0.811e-5■□□□□ 8.6
EIF3DO15371 TASP1-207ENST00000483898 754 ntTSL 510.01□□□□□ -0.811e-5■□□□□ 8.6
EIF3DO15371 SMAD3-211ENST00000559460 568 ntTSL 49.95□□□□□ -0.821e-5■□□□□ 8.6
EIF3DO15371 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC9.84□□□□□ -0.831e-5■□□□□ 8.6
EIF3DO15371 TYK2-208ENST00000527481 628 ntTSL 39.78□□□□□ -0.841e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.859e-8■□□□□ 8.6
EIF3DO15371 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.862e-7■□□□□ 8.6
EIF3DO15371 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.882e-7■□□□□ 8.6
EIF3DO15371 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.921e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-205ENST00000558123 1934 ntTSL 59.14□□□□□ -0.959e-8■□□□□ 8.6
EIF3DO15371 NPM1-208ENST00000521672 597 ntTSL 59.03□□□□□ -0.968e-12■□□□□ 8.6
EIF3DO15371 NUSAP1-209ENST00000559659 529 ntTSL 29□□□□□ -0.979e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-206ENST00000558582 546 ntTSL 58.97□□□□□ -0.979e-8■□□□□ 8.6
EIF3DO15371 NUSAP1-207ENST00000559046 580 ntTSL 58.94□□□□□ -0.989e-8■□□□□ 8.6
EIF3DO15371 EFTUD2-212ENST00000589211 584 ntTSL 48.91□□□□□ -0.981e-5■□□□□ 8.6
EIF3DO15371 RNF213-205ENST00000558116 3768 ntTSL 28.89□□□□□ -0.992e-7■□□□□ 8.6
EIF3DO15371 PON2-210ENST00000478801 555 ntTSL 48.88□□□□□ -0.991e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.019e-8■□□□□ 8.6
EIF3DO15371 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.022e-7■□□□□ 8.6
EIF3DO15371 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.042e-7■□□□□ 8.6
EIF3DO15371 LRP1-206ENST00000554118 418 ntTSL 28.51□□□□□ -1.059e-8■□□□□ 8.6
EIF3DO15371 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.091e-5■□□□□ 8.6
EIF3DO15371 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.18e-12■□□□□ 8.6
EIF3DO15371 CCNB1-206ENST00000508407 780 ntTSL 28.13□□□□□ -1.118e-13■□□□□ 8.6
EIF3DO15371 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.169e-8■□□□□ 8.6
EIF3DO15371 YWHAB-208ENST00000633979 689 ntTSL 37.73□□□□□ -1.172e-10■□□□□ 8.6
EIF3DO15371 EFTUD2-211ENST00000588374 524 ntTSL 37.4□□□□□ -1.221e-5■□□□□ 8.6
EIF3DO15371 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.239e-8■□□□□ 8.6
EIF3DO15371 MLF2-204ENST00000536249 570 ntTSL 27.05□□□□□ -1.289e-8■□□□□ 8.6
EIF3DO15371 SNHG14-225ENST00000626200 2073 ntTSL 1 (best)6.79□□□□□ -1.321e-5■□□□□ 8.6
EIF3DO15371 NPM1-205ENST00000518587 670 ntTSL 26.66□□□□□ -1.348e-12■□□□□ 8.6
EIF3DO15371 EFTUD2-225ENST00000593072 551 ntTSL 56.62□□□□□ -1.351e-5■□□□□ 8.6
EIF3DO15371 NPM1-211ENST00000523622 247 ntTSL 36.52□□□□□ -1.378e-12■□□□□ 8.6
EIF3DO15371 SMG1-204ENST00000561940 964 ntTSL 26.01□□□□□ -1.459e-8■□□□□ 8.6
EIF3DO15371 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.87□□□□□ -1.478e-12■□□□□ 8.6
EIF3DO15371 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.82□□□□□ -1.488e-12■□□□□ 8.6
EIF3DO15371 ANKRD17-206ENST00000514252 3259 ntTSL 25.29□□□□□ -1.561e-5■□□□□ 8.6
Retrieved 100 of 4,069 protein–RNA pairs in 21.5 ms