Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC36.23■■■■□ 3.39
CHD1O14646 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC36.22■■■■□ 3.39
CHD1O14646 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC36.22■■■■□ 3.39
CHD1O14646 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC36.22■■■■□ 3.39
CHD1O14646 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC36.22■■■■□ 3.39
CHD1O14646 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC36.22■■■■□ 3.39
CHD1O14646 SHF-207ENST00000560540 2062 ntTSL 5 BASIC36.22■■■■□ 3.39
CHD1O14646 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC36.22■■■■□ 3.39
CHD1O14646 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC36.22■■■■□ 3.39
CHD1O14646 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC36.22■■■■□ 3.39
CHD1O14646 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
CHD1O14646 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC36.21■■■■□ 3.39
CHD1O14646 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC36.21■■■■□ 3.39
CHD1O14646 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC36.21■■■■□ 3.39
CHD1O14646 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC36.21■■■■□ 3.39
CHD1O14646 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC36.21■■■■□ 3.39
CHD1O14646 HLA-L-211ENST00000482052 1765 ntBASIC36.21■■■■□ 3.39
CHD1O14646 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC36.21■■■■□ 3.39
CHD1O14646 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC36.21■■■■□ 3.39
CHD1O14646 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
CHD1O14646 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC36.21■■■■□ 3.39
CHD1O14646 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
CHD1O14646 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
CHD1O14646 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
CHD1O14646 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC36.2■■■■□ 3.39
CHD1O14646 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
CHD1O14646 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
CHD1O14646 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC36.2■■■■□ 3.38
CHD1O14646 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC36.2■■■■□ 3.38
CHD1O14646 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC36.2■■■■□ 3.38
CHD1O14646 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC36.2■■■■□ 3.38
CHD1O14646 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
CHD1O14646 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC36.19■■■■□ 3.38
CHD1O14646 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
CHD1O14646 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
CHD1O14646 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC36.19■■■■□ 3.38
CHD1O14646 AL158047.1-201ENST00000445918 881 ntBASIC36.19■■■■□ 3.38
CHD1O14646 MIR4758-201ENST00000577688 71 ntBASIC36.19■■■■□ 3.38
CHD1O14646 AC005224.4-201ENST00000583262 1652 ntBASIC36.19■■■■□ 3.38
CHD1O14646 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
CHD1O14646 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
CHD1O14646 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC36.18■■■■□ 3.38
CHD1O14646 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC36.18■■■■□ 3.38
CHD1O14646 AC142381.4-202ENST00000563973 229 ntBASIC36.18■■■■□ 3.38
CHD1O14646 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
CHD1O14646 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC36.18■■■■□ 3.38
CHD1O14646 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
CHD1O14646 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC36.17■■■■□ 3.38
CHD1O14646 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC36.17■■■■□ 3.38
CHD1O14646 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
CHD1O14646 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC36.17■■■■□ 3.38
CHD1O14646 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC36.17■■■■□ 3.38
CHD1O14646 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC36.17■■■■□ 3.38
CHD1O14646 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC36.16■■■■□ 3.38
CHD1O14646 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
CHD1O14646 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC36.16■■■■□ 3.38
CHD1O14646 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC36.16■■■■□ 3.38
CHD1O14646 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC36.15■■■■□ 3.38
CHD1O14646 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC36.15■■■■□ 3.38
CHD1O14646 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC36.15■■■■□ 3.38
CHD1O14646 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC36.15■■■■□ 3.38
CHD1O14646 USP36-216ENST00000589424 970 ntTSL 5 BASIC36.15■■■■□ 3.38
CHD1O14646 MKRN4P-201ENST00000444706 1521 ntBASIC36.14■■■■□ 3.38
CHD1O14646 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 UNC93B4-201ENST00000505679 747 ntBASIC36.14■■■■□ 3.38
CHD1O14646 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC36.14■■■■□ 3.38
CHD1O14646 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC36.14■■■■□ 3.38
CHD1O14646 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC36.14■■■■□ 3.38
CHD1O14646 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC36.14■■■■□ 3.38
CHD1O14646 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC36.14■■■■□ 3.38
CHD1O14646 CBFB-203ENST00000561924 584 ntTSL 5 BASIC36.14■■■■□ 3.38
CHD1O14646 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC36.14■■■■□ 3.38
CHD1O14646 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHD1O14646 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC36.13■■■■□ 3.38
CHD1O14646 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC36.13■■■■□ 3.37
CHD1O14646 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC36.13■■■■□ 3.37
CHD1O14646 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
CHD1O14646 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
CHD1O14646 RPS2P4-201ENST00000476944 856 ntBASIC36.13■■■■□ 3.37
CHD1O14646 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC36.13■■■■□ 3.37
CHD1O14646 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC36.13■■■■□ 3.37
CHD1O14646 AC010536.3-201ENST00000620306 533 ntBASIC36.13■■■■□ 3.37
CHD1O14646 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC36.13■■■■□ 3.37
CHD1O14646 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC36.13■■■■□ 3.37
CHD1O14646 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC36.13■■■■□ 3.37
CHD1O14646 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
CHD1O14646 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
CHD1O14646 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC36.13■■■■□ 3.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms