Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 RPS2P4-201ENST00000476944 856 ntBASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.99■□□□□ 0.79
COL6A6A6NMZ7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 AC008550.1-201ENST00000511500 884 ntBASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 AC092803.2-201ENST00000564287 1899 ntBASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL6A6A6NMZ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 AC083880.1-201ENST00000608266 535 ntBASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 KRT87P-202ENST00000534226 1464 ntBASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 AC135731.1-201ENST00000569415 2548 ntBASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 AL158047.1-201ENST00000445918 881 ntBASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.97■□□□□ 0.79
COL6A6A6NMZ7 AC142086.6-201ENST00000621154 1765 ntBASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.96■□□□□ 0.79
COL6A6A6NMZ7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
COL6A6A6NMZ7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 AC079140.4-201ENST00000507448 529 ntBASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL6A6A6NMZ7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL6A6A6NMZ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 MKRN4P-201ENST00000444706 1521 ntBASIC19.92■□□□□ 0.78
COL6A6A6NMZ7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms