Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC13.78□□□□□ -0.2
O00370 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.78□□□□□ -0.2
O00370 AC009118.3-201ENST00000622896 873 ntBASIC13.78□□□□□ -0.2
O00370 AC026271.1-201ENST00000447794 1348 ntBASIC13.78□□□□□ -0.2
O00370 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.78□□□□□ -0.2
O00370 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC13.78□□□□□ -0.2
O00370 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
O00370 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
O00370 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
O00370 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.78□□□□□ -0.2
O00370 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC13.78□□□□□ -0.2
O00370 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.78□□□□□ -0.2
O00370 POM121L7P-201ENST00000329949 2404 ntBASIC13.78□□□□□ -0.2
O00370 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
O00370 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
O00370 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
O00370 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
O00370 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.77□□□□□ -0.2
O00370 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
O00370 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
O00370 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
O00370 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
O00370 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
O00370 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.77□□□□□ -0.21
O00370 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 SERF2-205ENST00000403425 690 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 RBMXP1-201ENST00000408004 1191 ntBASIC13.77□□□□□ -0.21
O00370 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
O00370 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.77□□□□□ -0.21
O00370 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC13.77□□□□□ -0.21
O00370 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
O00370 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 AC104117.1-201ENST00000517817 900 ntBASIC13.77□□□□□ -0.21
O00370 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
O00370 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.77□□□□□ -0.21
O00370 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC13.77□□□□□ -0.21
O00370 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 AC010601.2-201ENST00000623060 774 ntBASIC13.77□□□□□ -0.21
O00370 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.77□□□□□ -0.21
O00370 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
O00370 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
O00370 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
O00370 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 AL805961.2-201ENST00000642139 4817 ntBASIC13.76□□□□□ -0.21
O00370 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
O00370 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
O00370 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
O00370 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.76□□□□□ -0.21
O00370 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
O00370 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.76□□□□□ -0.21
O00370 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.76□□□□□ -0.21
O00370 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 RPSAP16-201ENST00000447583 821 ntBASIC13.76□□□□□ -0.21
O00370 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 AC233724.9-201ENST00000511694 407 ntBASIC13.76□□□□□ -0.21
O00370 AC133555.4-201ENST00000569081 152 ntBASIC13.76□□□□□ -0.21
O00370 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
O00370 AC023509.4-201ENST00000602306 775 ntBASIC13.76□□□□□ -0.21
O00370 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.76□□□□□ -0.21
O00370 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC13.76□□□□□ -0.21
O00370 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms