Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SCN2BO60939 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC12.27□□□□□ -0.45
SCN2BO60939 RBMXP2-201ENST00000434705 1168 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 LYPLA2P1-203ENST00000447689 696 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC12.27□□□□□ -0.45
SCN2BO60939 PRDX2P3-201ENST00000515779 586 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 SRPK2P-201ENST00000523408 1100 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC12.27□□□□□ -0.45
SCN2BO60939 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.27□□□□□ -0.45
SCN2BO60939 GOLGA2P7-209ENST00000560408 745 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 AC023509.4-201ENST00000602306 775 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SCN2BO60939 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 IMPDH1P8-201ENST00000413639 1525 ntBASIC12.27□□□□□ -0.45
SCN2BO60939 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 DBIL5P-203ENST00000536214 2677 ntBASIC12.26□□□□□ -0.45
SCN2BO60939 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SCN2BO60939 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SCN2BO60939 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SCN2BO60939 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.26□□□□□ -0.45
SCN2BO60939 AC104961.1-201ENST00000427605 771 ntBASIC12.26□□□□□ -0.45
SCN2BO60939 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 AC079112.1-201ENST00000454972 939 ntBASIC12.26□□□□□ -0.45
SCN2BO60939 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.26□□□□□ -0.45
SCN2BO60939 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 HNRNPA1P7-201ENST00000521273 963 ntBASIC12.26□□□□□ -0.45
SCN2BO60939 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
SCN2BO60939 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SCN2BO60939 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SCN2BO60939 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 STRADA-253ENST00000640979 2086 ntTSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms