Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AP000350.6-201ENST00000609510 5637 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 MIR769-201ENST00000390225 118 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC073210.1-201ENST00000414799 232 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 HNRNPA1P8-201ENST00000436090 951 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RN7SKP155-201ENST00000516031 288 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RN7SL774P-201ENST00000577467 290 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 MIR4525-201ENST00000580000 75 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC026120.2-201ENST00000617239 309 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 GPR182-203ENST00000622922 591 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 UTP14A-201ENST00000394422 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 WDR25-206ENST00000554998 1952 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 KRT8P5-201ENST00000592443 1458 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC099521.2-201ENST00000619354 2036 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 AC092902.5-201ENST00000641650 3256 ntBASIC10.53□□□□□ -0.72
RAB40CQ96S21 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 RASSF8-203ENST00000405154 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
RAB40CQ96S21 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC10.53□□□□□ -0.72
RAB40CQ96S21 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
RAB40CQ96S21 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
RAB40CQ96S21 LHFPL5-201ENST00000360215 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC10.52□□□□□ -0.72
RAB40CQ96S21 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
RAB40CQ96S21 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC10.52□□□□□ -0.72
RAB40CQ96S21 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 PPP1R26P5-201ENST00000416640 3664 ntBASIC10.52□□□□□ -0.72
RAB40CQ96S21 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
RAB40CQ96S21 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 PYY2-201ENST00000315776 282 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RAB40CQ96S21 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 Z97180.1-201ENST00000445173 988 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 NOC2LP1-201ENST00000450578 752 ntBASIC10.52□□□□□ -0.73
RAB40CQ96S21 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.52□□□□□ -0.73
RAB40CQ96S21 AC099548.2-209ENST00000480264 625 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms