Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LMO3Q8TAP4 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 KIF18BP1-201ENST00000567585 2264 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC087164.2-201ENST00000624514 3130 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC015813.5-201ENST00000624641 1514 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 ANKRD26P1-203ENST00000569528 966 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC015936.1-201ENST00000591013 1028 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC136475.7-201ENST00000602949 592 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 AC134682.1-201ENST00000569285 3377 ntBASIC13.71□□□□□ -0.21
LMO3Q8TAP4 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC13.71□□□□□ -0.21
LMO3Q8TAP4 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 AC068669.1-201ENST00000623793 2228 ntBASIC13.71□□□□□ -0.22
LMO3Q8TAP4 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LMO3Q8TAP4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 FMO6P-202ENST00000367754 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 KRT19P4-201ENST00000443208 943 ntBASIC13.7□□□□□ -0.22
LMO3Q8TAP4 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 RN7SL646P-201ENST00000492969 297 ntBASIC13.7□□□□□ -0.22
LMO3Q8TAP4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LMO3Q8TAP4 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms