Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.34□□□□□ -0.43
SCN2BO60939 AL512378.1-201ENST00000394808 2100 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 ALOX15P2-201ENST00000340858 1897 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SCN2BO60939 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
SCN2BO60939 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SCN2BO60939 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SCN2BO60939 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
SCN2BO60939 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 YAP1P1-201ENST00000401504 1393 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 AC108734.2-201ENST00000420887 1069 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 AC078991.1-201ENST00000437297 610 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 AC092638.2-201ENST00000441105 947 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC12.33□□□□□ -0.44
SCN2BO60939 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 RPL35P1-201ENST00000450819 370 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 GNG10P1-201ENST00000452289 199 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 BICD1P1-201ENST00000457832 1222 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 AC022494.1-201ENST00000466044 728 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 RPL7AP53-201ENST00000468834 793 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.33□□□□□ -0.44
SCN2BO60939 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SCN2BO60939 AC013553.1-201ENST00000560906 267 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.33□□□□□ -0.44
SCN2BO60939 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 AL121753.2-201ENST00000624581 1461 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 AC015818.9-201ENST00000591705 4582 ntBASIC12.33□□□□□ -0.44
SCN2BO60939 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
SCN2BO60939 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SCN2BO60939 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.33□□□□□ -0.44
SCN2BO60939 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SCN2BO60939 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SCN2BO60939 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SCN2BO60939 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SCN2BO60939 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.32□□□□□ -0.44
SCN2BO60939 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.32□□□□□ -0.44
SCN2BO60939 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms