Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 AC018358.1-201ENST00000631079 1402 ntBASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CDC42SE1Q9NRR8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CDC42SE1Q9NRR8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CDC42SE1Q9NRR8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CDC42SE1Q9NRR8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 AC005229.4-201ENST00000610085 2198 ntBASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
CDC42SE1Q9NRR8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms