Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.72■□□□□ 0.59
GCM1Q9NP62 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GCM1Q9NP62 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.72■□□□□ 0.59
GCM1Q9NP62 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GCM1Q9NP62 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GCM1Q9NP62 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GCM1Q9NP62 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GCM1Q9NP62 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GCM1Q9NP62 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GCM1Q9NP62 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GCM1Q9NP62 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 AC005837.3-201ENST00000612163 286 ntBASIC18.71■□□□□ 0.59
GCM1Q9NP62 AL355001.2-201ENST00000620617 1191 ntBASIC18.71■□□□□ 0.59
GCM1Q9NP62 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 DUSP8P5-201ENST00000422884 1815 ntBASIC18.71■□□□□ 0.59
GCM1Q9NP62 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GCM1Q9NP62 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GCM1Q9NP62 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GCM1Q9NP62 AC004687.1-201ENST00000579003 1625 ntBASIC18.71■□□□□ 0.58
GCM1Q9NP62 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.7■□□□□ 0.58
GCM1Q9NP62 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GCM1Q9NP62 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCM1Q9NP62 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCM1Q9NP62 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.69■□□□□ 0.58
GCM1Q9NP62 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GCM1Q9NP62 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCM1Q9NP62 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.69■□□□□ 0.58
GCM1Q9NP62 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.69■□□□□ 0.58
GCM1Q9NP62 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCM1Q9NP62 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.69■□□□□ 0.58
GCM1Q9NP62 AL031432.3-201ENST00000607698 485 ntBASIC18.69■□□□□ 0.58
GCM1Q9NP62 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCM1Q9NP62 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCM1Q9NP62 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.69■□□□□ 0.58
GCM1Q9NP62 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCM1Q9NP62 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.68■□□□□ 0.58
GCM1Q9NP62 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GCM1Q9NP62 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCM1Q9NP62 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCM1Q9NP62 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.68■□□□□ 0.58
GCM1Q9NP62 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GCM1Q9NP62 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GCM1Q9NP62 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCM1Q9NP62 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GCM1Q9NP62 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 SUDS3P1-201ENST00000505831 966 ntBASIC18.67■□□□□ 0.58
GCM1Q9NP62 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.67■□□□□ 0.58
GCM1Q9NP62 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
GCM1Q9NP62 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCM1Q9NP62 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.66■□□□□ 0.58
GCM1Q9NP62 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.66■□□□□ 0.58
GCM1Q9NP62 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.66■□□□□ 0.58
GCM1Q9NP62 AP001330.3-201ENST00000520123 633 ntBASIC18.66■□□□□ 0.58
GCM1Q9NP62 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GCM1Q9NP62 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GCM1Q9NP62 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
GCM1Q9NP62 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCM1Q9NP62 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms