Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf49Q9H741 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf49Q9H741 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
C12orf49Q9H741 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.49■□□□□ 0.71
C12orf49Q9H741 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf49Q9H741 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
C12orf49Q9H741 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
C12orf49Q9H741 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf49Q9H741 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
C12orf49Q9H741 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf49Q9H741 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf49Q9H741 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
C12orf49Q9H741 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf49Q9H741 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
C12orf49Q9H741 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
C12orf49Q9H741 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf49Q9H741 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.48■□□□□ 0.71
C12orf49Q9H741 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.48■□□□□ 0.71
C12orf49Q9H741 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C12orf49Q9H741 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf49Q9H741 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf49Q9H741 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.47■□□□□ 0.71
C12orf49Q9H741 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.47■□□□□ 0.71
C12orf49Q9H741 RARRES2P6-201ENST00000567333 442 ntBASIC19.47■□□□□ 0.71
C12orf49Q9H741 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf49Q9H741 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf49Q9H741 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf49Q9H741 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C12orf49Q9H741 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.46■□□□□ 0.71
C12orf49Q9H741 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.46■□□□□ 0.71
C12orf49Q9H741 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
C12orf49Q9H741 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.46■□□□□ 0.71
C12orf49Q9H741 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
C12orf49Q9H741 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C12orf49Q9H741 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
C12orf49Q9H741 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf49Q9H741 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 DUSP8P3-201ENST00000399571 1760 ntBASIC19.45■□□□□ 0.7
C12orf49Q9H741 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf49Q9H741 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf49Q9H741 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 AP005435.1-201ENST00000529293 1178 ntBASIC19.45■□□□□ 0.7
C12orf49Q9H741 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf49Q9H741 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf49Q9H741 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.45■□□□□ 0.7
C12orf49Q9H741 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C12orf49Q9H741 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.44■□□□□ 0.7
C12orf49Q9H741 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
C12orf49Q9H741 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
C12orf49Q9H741 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf49Q9H741 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf49Q9H741 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf49Q9H741 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf49Q9H741 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C12orf49Q9H741 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.43■□□□□ 0.7
C12orf49Q9H741 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.43■□□□□ 0.7
C12orf49Q9H741 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf49Q9H741 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf49Q9H741 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf49Q9H741 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
C12orf49Q9H741 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.42■□□□□ 0.7
C12orf49Q9H741 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C12orf49Q9H741 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.42■□□□□ 0.7
C12orf49Q9H741 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms