Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
THUMPD3Q9BV44 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
THUMPD3Q9BV44 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 AC087742.1-201ENST00000575880 1738 ntBASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
THUMPD3Q9BV44 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
THUMPD3Q9BV44 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 FBXW4P1-201ENST00000426721 2239 ntBASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 BX664725.1-201ENST00000438252 379 ntBASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
THUMPD3Q9BV44 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 AL137060.1-201ENST00000618151 2648 ntBASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 SNX5-217ENST00000606557 1087 ntBASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
THUMPD3Q9BV44 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
THUMPD3Q9BV44 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
THUMPD3Q9BV44 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 AL451085.2-201ENST00000605085 799 ntBASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
THUMPD3Q9BV44 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
THUMPD3Q9BV44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
THUMPD3Q9BV44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms