Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCGF1Q9BSM1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 AC144652.1-201ENST00000609974 1624 ntBASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 AC091305.1-201ENST00000479476 895 ntBASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 AC027682.1-201ENST00000562846 899 ntBASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCGF1Q9BSM1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 ZNRF2P3-201ENST00000424200 374 ntBASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 AC105265.2-201ENST00000467189 838 ntBASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 FP325331.1-202ENST00000623531 1380 ntBASIC18.3■□□□□ 0.52
PCGF1Q9BSM1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 LINC01529-204ENST00000636474 1715 ntBASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 AC099791.1-201ENST00000416440 715 ntBASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCGF1Q9BSM1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 CA15P2-201ENST00000611168 834 ntBASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 RASA4CP-201ENST00000424092 1398 ntBASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.28■□□□□ 0.52
PCGF1Q9BSM1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCGF1Q9BSM1 AC133637.1-201ENST00000624115 1537 ntBASIC18.27■□□□□ 0.51
PCGF1Q9BSM1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.27■□□□□ 0.51
PCGF1Q9BSM1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.27■□□□□ 0.51
PCGF1Q9BSM1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCGF1Q9BSM1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms